RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 ZSCAN16Q9H4T2 348 aaPredicted RBP23.49■■□□□ 1.35
SNF8-216ENST00000573795 TMEM30AQ9NV96 361 aa23.49■■□□□ 1.35
SNF8-216ENST00000573795 STX6O43752 255 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 GRIK1P39086 918 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 OPRD1P41143 372 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 CACNA2D1P54289 1103 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 CYP27A1Q02318 531 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 STK38Q15208 465 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 CNNM4Q6P4Q7 775 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 DENND5BQ6ZUT9 1274 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 STXBP4Q6ZWJ1 553 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 MYCBPAPQ8TBZ2 947 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 CEP295NLQ96MC4 621 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 AGPAT3Q9NRZ7 376 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 PCDHGA5Q9Y5G8 931 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 USP24Q9UPU5 2620 aa23.48■■□□□ 1.35
SNF8-216ENST00000573795 DCLK1O15075 740 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 KRT37O76014 449 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 OLFM2O95897 454 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 MPLP40238 635 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 EHHADHQ08426 723 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 MAPRE1Q15691 268 aaKnown RBP23.47■■□□□ 1.35
SNF8-216ENST00000573795 SNRNP35Q16560 246 aaKnown RBP23.47■■□□□ 1.35
SNF8-216ENST00000573795 MDH1BQ5I0G3 518 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 C12orf50Q8NA57 414 aaPredicted RBP23.47■■□□□ 1.35
SNF8-216ENST00000573795 EXOC4Q96A65 974 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 MMS19Q96T76 1030 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 RNF38Q9H0F5 515 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 KIAA1586Q9HCI6 787 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 EBF1Q9UH73 591 aa23.47■■□□□ 1.35
SNF8-216ENST00000573795 R3HCC1Q9Y3T6 440 aaKnown RBP23.47■■□□□ 1.35
SNF8-216ENST00000573795 ZNF840PA6NDX5 716 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 F8VP50 259 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 K7EQS6 105 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 LEFTY2O00292 366 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 SPTLC2O15270 562 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 TACC1O75410 805 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 APBB3O95704 486 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 PFKLP17858 780 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 ASIC1P78348 528 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 PSMD6Q15008 389 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 FAM26FQ5R3K3 315 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 SHC4Q6S5L8 630 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 RDH13Q8NBN7 331 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 ACDQ96AP0 544 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 DHX58Q96C10 678 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 CGRRF1Q99675 332 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 CUEDC2Q9H467 287 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 DPEP3Q9H4B8 488 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 TRPM5Q9NZQ8 1165 aa23.46■■□□□ 1.35
SNF8-216ENST00000573795 ABCA7Q8IZY2 2146 aa23.45■■□□□ 1.35
SNF8-216ENST00000573795 MYOFQ9NZM1 2061 aa23.45■■□□□ 1.35
SNF8-216ENST00000573795 NUP205Q92621 2012 aa23.45■■□□□ 1.35
SNF8-216ENST00000573795 TRIM66O15016 1216 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 CLIC2O15247 247 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 PPP6R2O75170 966 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 NFATC1O95644 943 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 DLATP10515 647 aaKnown RBP23.45■■□□□ 1.34
SNF8-216ENST00000573795 CHRM1P11229 460 aaPredicted RBP23.45■■□□□ 1.34
SNF8-216ENST00000573795 NOP14P78316 857 aaKnown RBP23.45■■□□□ 1.34
SNF8-216ENST00000573795 SLC7A9P82251 487 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 CYP24A1Q07973 514 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 PSMD2Q13200 908 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 STPG1Q5TH74 334 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 IL31Q6EBC2 164 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 TCEAL6Q6IPX3 200 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 USP33Q8TEY7 942 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 SCFD1Q8WVM8 642 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 DDX1Q92499 740 aaKnown RBP23.45■■□□□ 1.34
SNF8-216ENST00000573795 ZNF516Q92618 1163 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 TCEAL3Q969E4 200 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 C8orf48Q96LL4 319 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 LRRC27Q9C0I9 530 aa23.45■■□□□ 1.34
SNF8-216ENST00000573795 TFIP11Q9UBB9 837 aaKnown RBP23.45■■□□□ 1.34
SNF8-216ENST00000573795 OAS1P00973 400 aaKnown RBP23.44■■□□□ 1.34
SNF8-216ENST00000573795 CYP17A1P05093 508 aa23.44■■□□□ 1.34
SNF8-216ENST00000573795 ANXA13P27216 316 aa23.44■■□□□ 1.34
SNF8-216ENST00000573795 CASP1P29466 404 aa23.44■■□□□ 1.34
SNF8-216ENST00000573795 GNL1P36915 607 aaPredicted RBP23.44■■□□□ 1.34
SNF8-216ENST00000573795 PDE6CP51160 858 aa23.44■■□□□ 1.34
SNF8-216ENST00000573795 MESP2Q0VG99 397 aa23.44■■□□□ 1.34
SNF8-216ENST00000573795 NR1H3Q13133 447 aa23.44■■□□□ 1.34
SNF8-216ENST00000573795 C7orf25Q9BPX7 421 aa23.44■■□□□ 1.34
SNF8-216ENST00000573795 ZNF518BQ9C0D4 1074 aa23.44■■□□□ 1.34
SNF8-216ENST00000573795 VPS45Q9NRW7 570 aa23.44■■□□□ 1.34
SNF8-216ENST00000573795 UBE4BO95155 1302 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 PTPN1P18031 435 aaKnown RBP23.43■■□□□ 1.34
SNF8-216ENST00000573795 TNNI1P19237 187 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 KCNA4P22459 653 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 CYP2J2P51589 502 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 FILIP1Q7Z7B0 1213 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 SFTPA1Q8IWL2 248 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 NELFCDQ8IXH7 590 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 OR6B3Q8NGW1 331 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 CCDC127Q96BQ5 260 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 XYLT2Q9H1B5 865 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 SNX25Q9H3E2 840 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 CPQQ9Y646 472 aa23.43■■□□□ 1.34
SNF8-216ENST00000573795 SCAMP3O14828 347 aaKnown RBP23.42■■□□□ 1.34
SNF8-216ENST00000573795 STAU1O95793 577 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms