RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 FBXO38Q6PIJ6 1188 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 TMCO3Q6UWJ1 677 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 CCNI2Q6ZMN8 369 aaPredicted RBP13.54□□□□□ -0.24
PRPF8-207ENST00000573681 PAQR9Q6ZVX9 377 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 CPNE8Q86YQ8 564 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 SCUBE3Q8IX30 993 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 KLHL7Q8IXQ5 586 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 IFT20Q8IY31 132 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 CRIPAKQ8N1N5 446 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 RXFP2Q8WXD0 754 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 SCLYQ96I15 445 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 RBM41Q96IZ5 413 aaKnown RBP13.54□□□□□ -0.24
PRPF8-207ENST00000573681 TMEM175Q9BSA9 504 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.54□□□□□ -0.24
PRPF8-207ENST00000573681 TBX21Q9UL17 535 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 ATP11BQ9Y2G3 1177 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 MYBPHLA2RUH7 354 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 I3L4J1 428 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 TULP2O00295 520 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 DPYSL4O14531 572 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 SYN3O14994 580 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 FBXO21O94952 628 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 OAZ2O95190 189 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 GLI1P08151 1106 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 CLTBP09497 229 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 CHRNA3P32297 505 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 CYP2C18P33260 490 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 TSPY1Q01534 308 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 MAP9Q49MG5 647 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 INTS6LQ5JSJ4 861 aaKnown RBP13.53□□□□□ -0.24
PRPF8-207ENST00000573681 CNKSR3Q6P9H4 555 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 OLFML1Q6UWY5 402 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 SLC26A9Q7LBE3 791 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 PIGZQ86VD9 579 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 KHSRPQ92945 711 aaKnown RBP eCLIP13.53□□□□□ -0.24
PRPF8-207ENST00000573681 PNKPQ96T60 521 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 NRDE2Q9H7Z3 1164 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 LRRC4Q9HBW1 653 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 ARFGAP3Q9NP61 516 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 STIM2Q9P246 746 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 EFR3BQ9Y2G0 817 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
PRPF8-207ENST00000573681 MYH10P35580 1976 aa13.52□□□□□ -0.24
PRPF8-207ENST00000573681 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 FAM187AA6NFU0 413 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 GABBR2O75899 941 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 LCP1P13796 627 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 SDC4P31431 198 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 PTPN7P35236 360 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 PTPN9P43378 593 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 CLCN6P51797 869 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 LBX1P52954 281 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 RBM10P98175 930 aaKnown RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 YWHAHQ04917 246 aaPredicted RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 ELAVL2Q12926 359 aaKnown RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 DHX34Q14147 1143 aaKnown RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 CYP1B1Q16678 543 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 BOLA3Q53S33 107 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 ZFYVE27Q5T4F4 411 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 CLEC20AQ6ZU45 233 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 NECAB2Q7Z6G3 386 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 DCP1BQ8IZD4 617 aaKnown RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 EMC1Q8N766 993 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 EIF1ADQ8N9N8 165 aaKnown RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 MAGOHBQ96A72 148 aaKnown RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 SMARCD1Q96GM5 515 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 PCED1BQ96HM7 432 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 PAWRQ96IZ0 340 aaKnown RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 RTP3Q9BQQ7 232 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 OXCT2Q9BYC2 517 aaPredicted RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 OSBPL8Q9BZF1 889 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 CSNK1G1Q9HCP0 422 aa13.52□□□□□ -0.25
PRPF8-207ENST00000573681 FEZ2Q9UHY8 353 aaPredicted RBP13.52□□□□□ -0.25
PRPF8-207ENST00000573681 SCN1AP35498 2009 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 PDCD11Q14690 1871 aaKnown RBP13.51□□□□□ -0.25
PRPF8-207ENST00000573681 FRMPD3Q5JV73 1810 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 ABHD14A-ACY1A0A1B0GW23 586 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 PIK3R2O00459 728 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 CLDN5O00501 218 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 NRP1O14786 923 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 EFCAB14O75071 495 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 PHF2O75151 1096 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 LRCH4O75427 683 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 AP1G2O75843 785 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 TRUB2O95900 331 aaKnown RBP13.51□□□□□ -0.25
PRPF8-207ENST00000573681 TIMP1P01033 207 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 RARAP10276 462 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 TNFRSF8P28908 595 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 TKTP29401 623 aaKnown RBP13.51□□□□□ -0.25
PRPF8-207ENST00000573681 VSNL1P62760 191 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 SMC1AQ14683 1233 aaKnown RBP13.51□□□□□ -0.25
PRPF8-207ENST00000573681 CCDC14Q49A88 953 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 PAN2Q504Q3 1202 aaKnown RBP13.51□□□□□ -0.25
PRPF8-207ENST00000573681 AADACL2Q6P093 401 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 C4orf50Q6ZRC1 276 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 DEFB128Q7Z7B8 93 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 FAM35AQ86V20 835 aa13.51□□□□□ -0.25
PRPF8-207ENST00000573681 CCDC50Q8IVM0 306 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms