RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 WNT6Q9Y6F9 365 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 TRAV19A0A0A6YYK7 116 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 FAM237AA0A1B0GTK4 181 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 ZNF840PA6NDX5 716 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 HDCP19113 662 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 RAP1GAPP47736 663 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 NRLP54845 237 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 MTF1Q14872 753 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 GAB4Q2WGN9 574 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 EML3Q32P44 896 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 SLC9A9Q8IVB4 645 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 CEP57L1Q8IYX8 460 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 SH3RF2Q8TEC5 729 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 OSCP1Q8WVF1 389 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 C8orf48Q96LL4 319 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 ECT2Q9H8V3 914 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 VRTNQ9H8Y1 702 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 NCDNQ9UBB6 729 aa19.32■□□□□ 0.68
CHD3-214ENST00000572579 USP17L7P0C7H9 530 aa19.31■□□□□ 0.68
CHD3-214ENST00000572579 HOXA6P31267 233 aa19.31■□□□□ 0.68
CHD3-214ENST00000572579 PXNP49023 591 aaPredicted RBP19.31■□□□□ 0.68
CHD3-214ENST00000572579 NDUFA8P51970 172 aa19.31■□□□□ 0.68
CHD3-214ENST00000572579 NOP14P78316 857 aaKnown RBP19.31■□□□□ 0.68
CHD3-214ENST00000572579 PDGFRLQ15198 375 aa19.31■□□□□ 0.68
CHD3-214ENST00000572579 MAPRE1Q15691 268 aaKnown RBP19.31■□□□□ 0.68
CHD3-214ENST00000572579 DENND5BQ6ZUT9 1274 aa19.31■□□□□ 0.68
CHD3-214ENST00000572579 SYNPOQ8N3V7 929 aa19.31■□□□□ 0.68
CHD3-214ENST00000572579 KCNK16Q96T55 309 aa19.31■□□□□ 0.68
CHD3-214ENST00000572579 DUS2Q9NX74 493 aaKnown RBP19.31■□□□□ 0.68
CHD3-214ENST00000572579 ARHGAP26Q9UNA1 814 aa19.31■□□□□ 0.68
CHD3-214ENST00000572579 KIF26AQ9ULI4 1882 aaPredicted RBP19.31■□□□□ 0.68
CHD3-214ENST00000572579 CKMP06732 381 aa19.3■□□□□ 0.68
CHD3-214ENST00000572579 ATICP31939 592 aa19.3■□□□□ 0.68
CHD3-214ENST00000572579 TNNC1P63316 161 aa19.3■□□□□ 0.68
CHD3-214ENST00000572579 TRPC3Q13507 836 aa19.3■□□□□ 0.68
CHD3-214ENST00000572579 RSPO4Q2I0M5 234 aaPredicted RBP19.3■□□□□ 0.68
CHD3-214ENST00000572579 LONP2Q86WA8 852 aa19.3■□□□□ 0.68
CHD3-214ENST00000572579 B3GALNT2Q8NCR0 500 aa19.3■□□□□ 0.68
CHD3-214ENST00000572579 TTC16Q8NEE8 873 aa19.3■□□□□ 0.68
CHD3-214ENST00000572579 CEP295NLQ96MC4 621 aa19.3■□□□□ 0.68
CHD3-214ENST00000572579 GOLPH3LQ9H4A5 285 aa19.3■□□□□ 0.68
CHD3-214ENST00000572579 DENND4CQ5VZ89 1909 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 A8MXQ7 604 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 OLFM2O95897 454 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 NR3C1P04150 777 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 RPN1P04843 607 aaKnown RBP19.29■□□□□ 0.68
CHD3-214ENST00000572579 TCF3P15923 654 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 PGFP49763 221 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 GRSF1Q12849 480 aaKnown RBP eCLIP19.29■□□□□ 0.68
CHD3-214ENST00000572579 TAF10Q12962 218 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 PSMD2Q13200 908 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 NCOA4Q13772 614 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 PPP2R5DQ14738 602 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 CC2D1AQ6P1N0 951 aaPredicted RBP19.29■□□□□ 0.68
CHD3-214ENST00000572579 ERMP1Q7Z2K6 904 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 SYAP1Q96A49 352 aaPredicted RBP19.29■□□□□ 0.68
CHD3-214ENST00000572579 EXOC1Q9NV70 894 aa19.29■□□□□ 0.68
CHD3-214ENST00000572579 MED19A0JLT2 244 aaPredicted RBP19.28■□□□□ 0.68
CHD3-214ENST00000572579 LEFTY2O00292 366 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 PDXKO00764 312 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 TNFRSF10BO14763 440 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 SCAMP3O14828 347 aaKnown RBP19.28■□□□□ 0.68
CHD3-214ENST00000572579 TRIM66O15016 1216 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 RNF40O75150 1001 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 OAS1P00973 400 aaKnown RBP19.28■□□□□ 0.68
CHD3-214ENST00000572579 SLC7A9P82251 487 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 DPYDQ12882 1025 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 ORC1Q13415 861 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 SIM2Q14190 667 aaPredicted RBP19.28■□□□□ 0.68
CHD3-214ENST00000572579 ZACNQ401N2 412 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 SV2AQ7L0J3 742 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 WDR5BQ86VZ2 330 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 ZMIZ2Q8NF64 920 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 SCAMP5Q8TAC9 235 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 GOLGA5Q8TBA6 731 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 SPATA32Q96LK8 384 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 P2RY13Q9BPV8 354 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 TRPM5Q9NZQ8 1165 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 HMGXB4Q9UGU5 601 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 NCOR2Q9Y618 2525 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 OBSL1O75147 1896 aa19.28■□□□□ 0.68
CHD3-214ENST00000572579 PHACTR2O75167 634 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 BEST1O76090 585 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 CHRM1P11229 460 aaPredicted RBP19.27■□□□□ 0.68
CHD3-214ENST00000572579 FOXK2Q01167 660 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 SPEM2Q0P670 501 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 MESP2Q0VG99 397 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 BIRC3Q13489 604 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 KCNB1Q14721 858 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 ZNF699Q32M78 642 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 SPOPLQ6IQ16 392 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 SCARA5Q6ZMJ2 495 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 PRR23BQ6ZRT6 265 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 SFTPA1Q8IWL2 248 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 FUKQ8N0W3 1084 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 FSIP1Q8NA03 581 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 IL37Q9NZH6 218 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 USP25Q9UHP3 1055 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 MAPK8IP1Q9UQF2 711 aa19.27■□□□□ 0.68
CHD3-214ENST00000572579 AKAP3O75969 853 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms