RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 ENGP17813 658 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 TIE1P35590 1138 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 P2RY2P41231 377 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 USP46P62068 366 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 PSMC1P62191 440 aaKnown RBP21.26■□□□□ 0.99
CCDC40-206ENST00000572083 MRPS21P82921 87 aaKnown RBP21.26■□□□□ 0.99
CCDC40-206ENST00000572083 RING1Q06587 406 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 ACAP1Q15027 740 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 POSTNQ15063 836 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 ZNF720Q7Z2F6 126 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 FILIP1Q7Z7B0 1213 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 BRSK2Q8IWQ3 736 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 LRRC52Q8N7C0 313 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 CXorf38Q8TB03 319 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 WHAMMQ8TF30 809 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 FUBP3Q96I24 572 aaKnown RBP eCLIP21.26■□□□□ 0.99
CCDC40-206ENST00000572083 BCCIPQ9P287 314 aaKnown RBP eCLIP21.26■□□□□ 0.99
CCDC40-206ENST00000572083 MBD1Q9UIS9 605 aaPredicted RBP21.26■□□□□ 0.99
CCDC40-206ENST00000572083 NEUROG3Q9Y4Z2 214 aa21.26■□□□□ 0.99
CCDC40-206ENST00000572083 ANKRD11Q6UB99 2663 aaPredicted RBP21.26■□□□□ 0.99
CCDC40-206ENST00000572083 ITPR1Q14643 2758 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 SPAARA0A1B0GVQ0 90 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 SGK1O00141 431 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 ATP2C2O75185 946 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 PCSK1P29120 753 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 SLC6A11P48066 632 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 LHX1P48742 406 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 SIM1P81133 766 aaPredicted RBP21.25■□□□□ 0.99
CCDC40-206ENST00000572083 DYMQ7RTS9 669 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 SYT12Q8IV01 421 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 TOP6BLQ8N6T0 577 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 KRI1Q8N9T8 703 aaKnown RBP21.25■□□□□ 0.99
CCDC40-206ENST00000572083 IL17RCQ8NAC3 791 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 HMGB4Q8WW32 186 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 MYLPFQ96A32 169 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 HVCN1Q96D96 273 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 KIF2CQ99661 725 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 MTMR12Q9C0I1 747 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 FSCN3Q9NQT6 498 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 GDAP2Q9NXN4 497 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 RBAKQ9NYW8 714 aaPredicted RBP21.25■□□□□ 0.99
CCDC40-206ENST00000572083 ITGA11Q9UKX5 1188 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 LHX6Q9UPM6 363 aa21.25■□□□□ 0.99
CCDC40-206ENST00000572083 LOC400499M0QZD8 3231 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 H3BQV1 296 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 TNFRSF10BO14763 440 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 GABRDO14764 452 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 PPP1R37O75864 691 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 CHRM1P11229 460 aaPredicted RBP21.24■□□□□ 0.99
CCDC40-206ENST00000572083 BDNFP23560 247 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 DDIT3P35638 169 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 MAGEA11P43364 429 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 PDE6CP51160 858 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 KDSRQ06136 332 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 SOWAHAQ2M3V2 549 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 C4orf50Q6ZRC1 276 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 C12orf40Q86WS4 652 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 SPATA18Q8TC71 538 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 NOC3LQ8WTT2 800 aaKnown RBP21.24■□□□□ 0.99
CCDC40-206ENST00000572083 CACTINQ8WUQ7 758 aaKnown RBP21.24■□□□□ 0.99
CCDC40-206ENST00000572083 SYT15Q9BQS2 421 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 SMPD4Q9NXE4 827 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 TRPM5Q9NZQ8 1165 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 TBC1D7Q9P0N9 293 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 SIX4Q9UIU6 781 aa21.24■□□□□ 0.99
CCDC40-206ENST00000572083 SMG1Q96Q15 3661 aaKnown RBP21.24■□□□□ 0.99
CCDC40-206ENST00000572083 CACNA1EQ15878 2313 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 GOLGA8IPA6NC78 632 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 MYMKA6NI61 221 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 GOLGA8JA6NMD2 632 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 CFIP05156 583 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 LMO2P25791 158 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 LONP1P36776 959 aaKnown RBP21.23■□□□□ 0.99
CCDC40-206ENST00000572083 GRIK1P39086 918 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 RESTQ13127 1097 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 DHCR24Q15392 516 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 EMC10Q5UCC4 262 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 LYSMD4Q5XG99 296 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 LMBRD2Q68DH5 695 aaPredicted RBP21.23■□□□□ 0.99
CCDC40-206ENST00000572083 FAM171BQ6P995 826 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 LRSAM1Q6UWE0 723 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 DENND5BQ6ZUT9 1274 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 PNKPQ96T60 521 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 MRPL44Q9H9J2 332 aaKnown RBP21.23■□□□□ 0.99
CCDC40-206ENST00000572083 POLMQ9NP87 494 aaPredicted RBP21.23■□□□□ 0.99
CCDC40-206ENST00000572083 CRTAC1Q9NQ79 661 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 MAGEC2Q9UBF1 373 aaPredicted RBP21.23■□□□□ 0.99
CCDC40-206ENST00000572083 MSRB2Q9Y3D2 182 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 CPQQ9Y646 472 aa21.23■□□□□ 0.99
CCDC40-206ENST00000572083 FASNP49327 2511 aaKnown RBP21.23■□□□□ 0.99
CCDC40-206ENST00000572083 ADAMTS9Q9P2N4 1935 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 PLXND1Q9Y4D7 1925 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 TCRBV21S2A2A0A5A6 115 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 KAT7O95251 611 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 APODP05090 189 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 ITPKAP23677 461 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 MAP7D1Q3KQU3 841 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 L1TD1Q5T7N2 865 aaKnown RBP21.22■□□□□ 0.99
CCDC40-206ENST00000572083 SLC23A3Q6PIS1 610 aa21.22■□□□□ 0.99
CCDC40-206ENST00000572083 PIP4P1Q86T03 277 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms