RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 GPIHBP1Q8IV16 184 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 STKLD1Q8NE28 680 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CCDC34Q96HJ3 373 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SMG9Q9H0W8 520 aaKnown RBP18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 EPC1Q9H2F5 836 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 GKN1Q9NS71 199 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ARHGAP26Q9UNA1 814 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 FRMD4BQ9Y2L6 1034 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 OLFM2O95897 454 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 P4HA1P13674 534 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 HOXA6P31267 233 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SOX9P48436 509 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 AMPD2Q01433 879 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TNK2Q07912 1038 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 BIRC3Q13489 604 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 GAS6Q14393 721 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 BECN1Q14457 450 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ZCWPW2Q504Y3 356 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 C1orf220Q5T0J3 134 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 INTS8Q75QN2 995 aaKnown RBP18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 RIN3Q8TB24 985 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ATRIPQ8WXE1 791 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TNIP3Q96KP6 325 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 DPEP3Q9H4B8 488 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 NXF1Q9UBU9 619 aaKnown RBP18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 DMXL1Q9Y485 3027 aa18.2■□□□□ 0.5
MAP1LC3B-208ENST00000570189 DCHS1Q96JQ0 3298 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 A8MXQ7 604 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 F8VP50 259 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TRDMT1O14717 391 aaKnown RBP18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ASS1P00966 412 aaKnown RBP18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 USP46P62068 366 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 DLG4P78352 724 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 MTF1Q14872 753 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 EDRF1Q3B7T1 1238 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 COBLL1Q53SF7 1204 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TMEM196Q5HYL7 178 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SV2AQ7L0J3 742 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 OSCP1Q8WVF1 389 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 OVCA2Q8WZ82 227 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CHFRQ96EP1 664 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SLC22A12Q96S37 553 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 B3GNT5Q9BYG0 378 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SMYD3Q9H7B4 428 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TMEM30AQ9NV96 361 aa18.19■□□□□ 0.5
MAP1LC3B-208ENST00000570189 C2orf78A6NCI8 922 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CKMP06732 381 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 NR2F2P24468 414 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 RPL13P26373 211 aaKnown RBP18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CXCL12P48061 93 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 NUCB2P80303 420 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SLC7A9P82251 487 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CC2D1AQ6P1N0 951 aaPredicted RBP18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 UNC93AQ86WB7 457 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CRYBG2Q8N1P7 616 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 RUBCNQ92622 972 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 FAXDC2Q96IV6 333 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ZNF518BQ9C0D4 1074 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 COMMD8Q9NX08 183 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 IL37Q9NZH6 218 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TRPM5Q9NZQ8 1165 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ATP8B3O60423 1300 aa18.18■□□□□ 0.5
MAP1LC3B-208ENST00000570189 GPR179Q6PRD1 2367 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 FAM92AA1XBS5 289 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ZNF840PA6NDX5 716 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 OTOL1A6NHN0 477 aaPredicted RBP18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 AKAP3O75969 853 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 RTN3O95197 1032 aaPredicted RBP18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 OAS1P00973 400 aaKnown RBP18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 HDCP19113 662 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 VAMP7P51809 220 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CACNA2D1P54289 1103 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 INCA1Q0VD86 236 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 PON2Q15165 354 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SNX30Q5VWJ9 437 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 PAQR9Q6ZVX9 377 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 FMR1NBQ8N0W7 255 aaPredicted RBP18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ARL14EPQ8N8R7 260 aaPredicted RBP18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 PDZD8Q8NEN9 1154 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ATP2A3Q93084 1043 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 EXOC4Q96A65 974 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SLITRK1Q96PX8 696 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CYP2S1Q96SQ9 504 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SDCBP2Q9H190 292 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 EBF3Q9H4W6 596 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TRPC7Q9HCX4 862 aa18.17■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TNFRSF10BO14763 440 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 GTF2H1P32780 548 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 PSMC2P35998 433 aaKnown RBP18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ASPAP45381 313 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CDH8P55286 799 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SATB1Q01826 763 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 EML3Q32P44 896 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CEP135Q66GS9 1140 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 TRIM68Q6AZZ1 485 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 FAM35AQ86V20 835 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 NUP93Q8N1F7 819 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 CPA6Q8N4T0 437 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 ENGASEQ8NFI3 743 aa18.16■□□□□ 0.5
MAP1LC3B-208ENST00000570189 SPATA20Q8TB22 786 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms