RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 IL17RCQ8NAC3 791 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 TXNDC5Q8NBS9 432 aaKnown RBP13.38□□□□□ -0.27
SNX29-207ENST00000568949 CEP295NLQ96MC4 621 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 FIZ1Q96SL8 496 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 BCCIPQ9P287 314 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNX29-207ENST00000568949 MBD1Q9UIS9 605 aaPredicted RBP13.38□□□□□ -0.27
SNX29-207ENST00000568949 GTF3C4Q9UKN8 822 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 L1RE1Q9UN81 338 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 CEP192Q8TEP8 1941 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 DMXL2Q8TDJ6 3036 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 MYOFQ9NZM1 2061 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 SGK1O00141 431 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 LEFTY2O00292 366 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 SLC9A3R1O14745 358 aaPredicted RBP13.37□□□□□ -0.27
SNX29-207ENST00000568949 OPHN1O60890 802 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 APODP05090 189 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 CYP17A1P05093 508 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 CFIP05156 583 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 SERPINF2P08697 491 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 GFPT1Q06210 699 aaPredicted RBP13.37□□□□□ -0.27
SNX29-207ENST00000568949 RILPL1Q5EBL4 403 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 ARL6IP4Q66PJ3 421 aaKnown RBP13.37□□□□□ -0.27
SNX29-207ENST00000568949 CRELD2Q6UXH1 353 aaPredicted RBP13.37□□□□□ -0.27
SNX29-207ENST00000568949 RABEPKQ7Z6M1 372 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 SPATA2LQ8IUW3 424 aaPredicted RBP13.37□□□□□ -0.27
SNX29-207ENST00000568949 SCN4BQ8IWT1 228 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 ADGRG2Q8IZP9 1017 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 CHCHD4Q8N4Q1 142 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 FRMD1Q8N878 549 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 SPATA17Q96L03 361 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 PNKPQ96T60 521 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 ST6GALNAC4Q9H4F1 302 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 GDAP2Q9NXN4 497 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
SNX29-207ENST00000568949 GPSM3Q9Y4H4 160 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 ADAMTS9Q9P2N4 1935 aa13.37□□□□□ -0.27
SNX29-207ENST00000568949 VWA3AA6NCI4 1184 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 TISP43B9A030 160 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 GABRDO14764 452 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 AP5Z1O43299 807 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 KAT7O95251 611 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 ITPKAP23677 461 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 ACAT1P24752 427 aaKnown RBP13.36□□□□□ -0.27
SNX29-207ENST00000568949 PCSK1P29120 753 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 POLR2BP30876 1174 aaKnown RBP13.36□□□□□ -0.27
SNX29-207ENST00000568949 TIE1P35590 1138 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 TNFRSF4P43489 277 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 KIR2DL1P43626 348 aaPredicted RBP13.36□□□□□ -0.27
SNX29-207ENST00000568949 LHX1P48742 406 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 SLC7A9P82251 487 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 ZXDBP98169 803 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 POSTNQ15063 836 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 DHCR24Q15392 516 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 SOWAHCQ53LP3 525 aaPredicted RBP13.36□□□□□ -0.27
SNX29-207ENST00000568949 FAM171BQ6P995 826 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 SLC36A4Q6YBV0 504 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 FILIP1Q7Z7B0 1213 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 LRRC52Q8N7C0 313 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 HMGB4Q8WW32 186 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 ZSCAN31Q96LW9 406 aaPredicted RBP13.36□□□□□ -0.27
SNX29-207ENST00000568949 AK8Q96MA6 479 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 GTPBP2Q9BX10 602 aaKnown RBP13.36□□□□□ -0.27
SNX29-207ENST00000568949 CAPN10Q9HC96 672 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 AGAP1Q9UPQ3 857 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 PCDH15Q96QU1 1955 aa13.36□□□□□ -0.27
SNX29-207ENST00000568949 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.35□□□□□ -0.27
SNX29-207ENST00000568949 EIF5BO60841 1220 aaKnown RBP13.35□□□□□ -0.27
SNX29-207ENST00000568949 TBCAO75347 108 aaKnown RBP13.35□□□□□ -0.27
SNX29-207ENST00000568949 ITGB3P05106 788 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 KRT18P05783 430 aaKnown RBP13.35□□□□□ -0.27
SNX29-207ENST00000568949 GRIA2P42262 883 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 SLC6A11P48066 632 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 PPP3CCP48454 512 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 FAM193AP78312 1265 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 TFAMQ00059 246 aaKnown RBP13.35□□□□□ -0.27
SNX29-207ENST00000568949 VSTM1Q6UX27 236 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 C4orf50Q6ZRC1 276 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 PDZD3Q86UT5 571 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 OSTM1Q86WC4 334 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 PGBD3Q8N328 593 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 TOP6BLQ8N6T0 577 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 C1orf127Q8N9H9 656 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
SNX29-207ENST00000568949 POMGNT1Q8WZA1 660 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 HVCN1Q96D96 273 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 CALML4Q96GE6 196 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 ZHX3Q9H4I2 956 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 BLOC1S4Q9NUP1 217 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 DNAAF2Q9NVR5 837 aaKnown RBP13.35□□□□□ -0.27
SNX29-207ENST00000568949 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 TRPM5Q9NZQ8 1165 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 APC2O95996 2303 aa13.35□□□□□ -0.27
SNX29-207ENST00000568949 ATXN2Q99700 1313 aaKnown RBP13.35□□□□□ -0.27
SNX29-207ENST00000568949 TCRBV21S2A2A0A5A6 115 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 ADAM23O75077 832 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 OLFM2O95897 454 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 ADH1CP00326 375 aa13.34□□□□□ -0.27
SNX29-207ENST00000568949 SYPP08247 313 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms