RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 NBEAQ8NFP9 2946 aa12.65□□□□□ -0.38
GTF3C1-209ENST00000568569 PCNX2A6NKB5 2137 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 MYH11P35749 1972 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 ANTXRLA6NF34 631 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 SGK1O00141 431 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 LEFTY2O00292 366 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 SLC9A3R1O14745 358 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 KLF8O95600 359 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 CYP17A1P05093 508 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 CFIP05156 583 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 TIE1P35590 1138 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 MAGEA11P43364 429 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 LHX1P48742 406 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 ZXDBP98169 803 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 CCDC142Q17RM4 750 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 MAP7D1Q3KQU3 841 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 PEAR1Q5VY43 1037 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 C4orf50Q6ZRC1 276 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 ADGRF2Q8IZF7 708 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 TOP6BLQ8N6T0 577 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 C1orf127Q8N9H9 656 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 CEP76Q8TAP6 659 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 LRRC15Q8TF66 581 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 RAD54LQ92698 747 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 HVCN1Q96D96 273 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 CEP295NLQ96MC4 621 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 PNKPQ96T60 521 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 BLOC1S4Q9NUP1 217 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 GDAP2Q9NXN4 497 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 MBD1Q9UIS9 605 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 SNX9Q9Y5X1 595 aa12.64□□□□□ -0.39
GTF3C1-209ENST00000568569 ATXN2Q99700 1313 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 THADAQ6YHU6 1953 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 DENND4CQ5VZ89 1909 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 TULP1O00294 542 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 GABRDO14764 452 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 KAT7O95251 611 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 APODP05090 189 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 CHRM1P11229 460 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 PLCG1P19174 1290 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 ITPKAP23677 461 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 ADSSP30520 456 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 SLC7A9P82251 487 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 GFPT1Q06210 699 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 RESTQ13127 1097 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 MCM6Q14566 821 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 DHCR24Q15392 516 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 DUOXA1Q1HG43 343 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 ZNF423Q2M1K9 1284 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 FAM171BQ6P995 826 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 VSTM1Q6UX27 236 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 FILIP1Q7Z7B0 1213 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 OSTM1Q86WC4 334 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 PROSER1Q86XN7 944 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 SFTPA1Q8IWL2 248 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 BRSK2Q8IWQ3 736 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 ADGRG2Q8IZP9 1017 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 FRMD1Q8N878 549 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 KRI1Q8N9T8 703 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 RASSF8Q8NHQ8 419 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 CACTINQ8WUQ7 758 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 HMGB4Q8WW32 186 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 SPATA17Q96L03 361 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 FAM213AQ9BRX8 229 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 GTPBP2Q9BX10 602 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 EHD2Q9NZN4 543 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 TRPM5Q9NZQ8 1165 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 ITGA11Q9UKX5 1188 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 SLC6A14Q9UN76 642 aa12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 ZNF638Q14966 1978 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-209ENST00000568569 OBSL1O75147 1896 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 TCRBV21S2A2A0A5A6 115 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 FAM221BA6H8Z2 402 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 TAF4O00268 1085 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 AP5Z1O43299 807 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 HCRTO43612 131 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 OPHN1O60890 802 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 PPP1R37O75864 691 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 ADH1CP00326 375 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 GRIK1P39086 918 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 GRIA2P42262 883 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 KIR2DL1P43626 348 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 PPP3CCP48454 512 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 WNT7BP56706 349 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 MESP2Q0VG99 397 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 HNRNPDQ14103 355 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 DENND5BQ6ZUT9 1274 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 ZNF720Q7Z2F6 126 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 RABEPKQ7Z6M1 372 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 PGBD3Q8N328 593 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 CHCHD4Q8N4Q1 142 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 LARP4BQ92615 738 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 MYLPFQ96A32 169 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 IKZF4Q9H2S9 585 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 CAPN10Q9HC96 672 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 ARHGEF4Q9NR80 690 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 RBAKQ9NYW8 714 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 MAGEC2Q9UBF1 373 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms