RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TRPM5Q9NZQ8 1165 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 GPR179Q6PRD1 2367 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 PTPRDP23468 1912 aa15.37■□□□□ 0.05
CMTM3-215ENST00000568477 VPS13AQ96RL7 3174 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 CLDN5O00501 218 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 ASS1P00966 412 aaKnown RBP15.36■□□□□ 0.05
CMTM3-215ENST00000568477 LMNAP02545 664 aaKnown RBP15.36■□□□□ 0.05
CMTM3-215ENST00000568477 TRIM49P0CI25 452 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 TRIM49CP0CI26 452 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 CHRNB1P11230 501 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 PTMSP20962 102 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 PDE6CP51160 858 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 USP46P62068 366 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 NOP14P78316 857 aaKnown RBP15.36■□□□□ 0.05
CMTM3-215ENST00000568477 ENPEPQ07075 957 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 ADAM9Q13443 819 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 MTF1Q14872 753 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 PDGFRLQ15198 375 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 ZCWPW2Q504Y3 356 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 TXNDC11Q6PKC3 985 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 SMYD4Q8IYR2 804 aaPredicted RBP15.36■□□□□ 0.05
CMTM3-215ENST00000568477 SLC22A12Q96S37 553 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 FAM83CQ9BQN1 747 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 MED10Q9BTT4 135 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 IMPG2Q9BZV3 1241 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 SDCBP2Q9H190 292 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 PRMT8Q9NR22 394 aaPredicted RBP15.36■□□□□ 0.05
CMTM3-215ENST00000568477 GCNT4Q9P109 453 aa15.36■□□□□ 0.05
CMTM3-215ENST00000568477 OTOGLQ3ZCN5 2332 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 KIF26AQ9ULI4 1882 aaPredicted RBP15.35■□□□□ 0.05
CMTM3-215ENST00000568477 USP34Q70CQ2 3546 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 C2orf78A6NCI8 922 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 KINO60870 393 aaKnown RBP15.35■□□□□ 0.05
CMTM3-215ENST00000568477 SMC2O95347 1197 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 PFKLP17858 780 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 HDCP19113 662 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 PPP3CCP48454 512 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 GCLMP48507 274 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 CACNA2D1P54289 1103 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 USP4Q13107 963 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 RUNX3Q13761 415 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 PPP2R5DQ14738 602 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 ZNF77Q15935 545 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 EDRF1Q3B7T1 1238 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 DGKKQ5KSL6 1271 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 MAMSTRQ6ZN01 415 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 FAM35AQ86V20 835 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 ARL14EPQ8N8R7 260 aaPredicted RBP15.35■□□□□ 0.05
CMTM3-215ENST00000568477 TTC16Q8NEE8 873 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 ENGASEQ8NFI3 743 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 RIN3Q8TB24 985 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 CYP2S1Q96SQ9 504 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 EBF3Q9H4W6 596 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 HPS4Q9NQG7 708 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 TMEM30AQ9NV96 361 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 HOOK1Q9UJC3 728 aaKnown RBP15.35■□□□□ 0.05
CMTM3-215ENST00000568477 PCDHGA2Q9Y5H1 932 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 GREB1Q4ZG55 1949 aa15.35■□□□□ 0.05
CMTM3-215ENST00000568477 FANCMQ8IYD8 2048 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 ZNF840PA6NDX5 716 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 CETN3O15182 167 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 TRIM21P19474 475 aaKnown RBP15.34■□□□□ 0.05
CMTM3-215ENST00000568477 ASPAP45381 313 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 IFNAR2P48551 515 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 CCR3P51677 355 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 PPP3CAQ08209 521 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 PON2Q15165 354 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 TRIM68Q6AZZ1 485 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 SPOPLQ6IQ16 392 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 TSSK4Q6SA08 328 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 ACOT1Q86TX2 421 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 UNC93AQ86WB7 457 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 ADSSL1Q8N142 457 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 CCDC150Q8NCX0 1101 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 SH3RF2Q8TEC5 729 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 ATRIPQ8WXE1 791 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 SMARCD1Q96GM5 515 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 SLITRK1Q96PX8 696 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 GSDMAQ96QA5 445 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 FAM126AQ9BYI3 521 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-215ENST00000568477 MMRN2Q9H8L6 949 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 DMAP1Q9NPF5 467 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-215ENST00000568477 RBM12Q9NTZ6 932 aaKnown RBP15.34■□□□□ 0.05
CMTM3-215ENST00000568477 ZSCAN32Q9NX65 697 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 ARHGAP26Q9UNA1 814 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 MYO15AQ9UKN7 3530 aa15.34■□□□□ 0.05
CMTM3-215ENST00000568477 ANAPC1Q9H1A4 1944 aa15.33■□□□□ 0.05
CMTM3-215ENST00000568477 RTN3O95197 1032 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-215ENST00000568477 ABL1P00519 1130 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 EPB41P11171 864 aaKnown RBP15.33■□□□□ 0.04
CMTM3-215ENST00000568477 ARSAP15289 507 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 GTF2H1P32780 548 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 PRCPP42785 496 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 NDST1P52848 882 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 AMPD2Q01433 879 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 IFRD2Q12894 506 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-215ENST00000568477 TAF10Q12962 218 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 ZNF658Q5TYW1 1059 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-215ENST00000568477 NUP93Q8N1F7 819 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 SPEM1Q8N4L4 309 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms