RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 PDE6CP51160 858 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 ASIC1P78348 528 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 GRSF1Q12849 480 aaKnown RBP eCLIP5□□□□□ -1.61
HERPUD1-213ENST00000568358 MTAPQ13126 283 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 RESTQ13127 1097 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 PUM1Q14671 1186 aaKnown RBP eCLIP5□□□□□ -1.61
HERPUD1-213ENST00000568358 NAA30Q147X3 362 aaPredicted RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 MAPRE1Q15691 268 aaKnown RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 DUOXA2Q1HG44 320 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 ITPRIPL2Q3MIP1 535 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 DGKKQ5KSL6 1271 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SLC39A4Q6P5W5 647 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 C4orf50Q6ZRC1 276 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 USP49Q70CQ1 688 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 GAREM2Q75VX8 874 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 DGLUCYQ7Z3D6 616 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SPATA2LQ8IUW3 424 aaPredicted RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 HSCBQ8IWL3 235 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 CMTM8Q8IZV2 173 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 GPD1LQ8N335 351 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SYNPOQ8N3V7 929 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SPEM1Q8N4L4 309 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 LRRC52Q8N7C0 313 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 MAB21L3Q8N8X9 362 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 ARMC2Q8NEN0 867 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SPATA18Q8TC71 538 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 BPIFB1Q8TDL5 484 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 MRPS31Q92665 395 aaKnown RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 DNAJC19Q96DA6 116 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SAAL1Q96ER3 474 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 FNBP1Q96RU3 617 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 TMEM209Q96SK2 561 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 FIZ1Q96SL8 496 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 MMS19Q96T76 1030 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 LPIN3Q9BQK8 851 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 ACBD6Q9BR61 282 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 DNAJC25Q9H1X3 360 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 TNMDQ9H2S6 317 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 CHRDQ9H2X0 955 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 CUEDC2Q9H467 287 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 PCIF1Q9H4Z3 704 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 DDX43Q9NXZ2 648 aaKnown RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 FAM13BQ9NYF5 915 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 EHD2Q9NZN4 543 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 CFAP45Q9UL16 551 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 MSRB2Q9Y3D2 182 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SNX9Q9Y5X1 595 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 MORC2Q9Y6X9 1032 aaPredicted RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 ANAPC1Q9H1A4 1944 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 SDK1Q7Z5N4 2213 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TRAV19A0A0A6YYK7 116 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 GOLGA8IPA6NC78 632 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 GOLGA8JA6NMD2 632 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 SLC38A8A6NNN8 435 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 PRR5-ARHGAP8B1AHC4 643 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TISP43B9A030 160 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 SPECC1L-ADORA2AF8WAN1 911 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 EIF3DO15371 548 aaKnown RBP eCLIP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 CUTAO60888 179 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 PHACTR2O75167 634 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 MOSPD3O75425 235 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TNNI1P19237 187 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TRIM21P19474 475 aaKnown RBP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 ANXA13P27216 316 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 MZF1P28698 734 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 ADSSP30520 456 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 CNR2P34972 360 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 GRIK1P39086 918 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 ME1P48163 572 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 NASPP49321 788 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 CDR1P51861 262 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 SNRPFP62306 86 aaKnown RBP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 ARHGAP8P85298 464 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 FCHO2Q0JRZ9 810 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 BIRC2Q13490 618 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TRPC3Q13507 836 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 PON2Q15165 354 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 ATL3Q6DD88 541 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 C16orf46Q6P387 395 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 FAM173BQ6P4H8 233 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TSSK4Q6SA08 328 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 CRELD2Q6UXH1 353 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 PRR23BQ6ZRT6 265 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 CEP68Q76N32 757 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 LRRTM3Q86VH5 581 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TMC8Q8IU68 726 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 BRSK2Q8IWQ3 736 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 SCN4BQ8IWT1 228 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 CEP57L1Q8IYX8 460 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 MAML2Q8IZL2 1156 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TMEM130Q8N3G9 435 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 PDCL2Q8N4E4 241 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TOP6BLQ8N6T0 577 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 ZBTB44Q8NCP5 570 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 LINC00301Q8NCQ3 95 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TTC16Q8NEE8 873 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 OR10T2Q8NGX3 314 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 CCDC26Q8TAB7 109 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 TTC8Q8TAM2 541 aa4.99□□□□□ -1.61
HERPUD1-213ENST00000568358 ADAM32Q8TC27 787 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms