RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 KCNK16Q96T55 309 aa10.13□□□□□ -0.79
SF3B3-211ENST00000568291 TSG101Q99816 390 aa10.13□□□□□ -0.79
SF3B3-211ENST00000568291 BRD9Q9H8M2 597 aa10.13□□□□□ -0.79
SF3B3-211ENST00000568291 ZFP14Q9HCL3 533 aa10.13□□□□□ -0.79
SF3B3-211ENST00000568291 NDRG2Q9UN36 371 aaKnown RBP10.13□□□□□ -0.79
SF3B3-211ENST00000568291 OBSL1O75147 1896 aa10.13□□□□□ -0.79
SF3B3-211ENST00000568291 SHISA7A6NL88 538 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 HEPACAM2A8MVW5 462 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 F8VP50 259 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 LILRB5O75023 590 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 ASS1P00966 412 aaKnown RBP10.12□□□□□ -0.79
SF3B3-211ENST00000568291 F11P03951 625 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 CCDC130P13994 396 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 GDI1P31150 447 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 AP3M2P53677 418 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 NLRP12P59046 1061 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 FKBP3Q00688 224 aaKnown RBP10.12□□□□□ -0.79
SF3B3-211ENST00000568291 RSPO4Q2I0M5 234 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-211ENST00000568291 ZNF394Q53GI3 561 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 TTI2Q6NXR4 508 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 TSSK4Q6SA08 328 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 PAQR9Q6ZVX9 377 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 ITIH5Q86UX2 942 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 CREBRFQ8IUR6 639 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 ZBTB44Q8NCP5 570 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 B3GALNT2Q8NCR0 500 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 C2orf15Q8WU43 125 aaKnown RBP10.12□□□□□ -0.79
SF3B3-211ENST00000568291 SECISBP2LQ93073 1101 aaKnown RBP10.12□□□□□ -0.79
SF3B3-211ENST00000568291 JAKMIP2Q96AA8 810 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 DHTKD1Q96HY7 919 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-211ENST00000568291 SLC22A12Q96S37 553 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 NELL2Q99435 816 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 ARID3AQ99856 593 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 MED10Q9BTT4 135 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 EPC1Q9H2F5 836 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 CHRDQ9H2X0 955 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 TRPC7Q9HCX4 862 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 FAM49BQ9NUQ9 324 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 DLL3Q9NYJ7 618 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 CCL26Q9Y258 94 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 ASB3Q9Y575 518 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 SCN1AP35498 2009 aa10.12□□□□□ -0.79
SF3B3-211ENST00000568291 C2orf78A6NCI8 922 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 PSMA7O14818 248 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 SCAMP3O14828 347 aaKnown RBP10.11□□□□□ -0.79
SF3B3-211ENST00000568291 MAPK13O15264 365 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 TADA3O75528 432 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 BEST1O76090 585 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 MICAL2O94851 1124 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 STAU1O95793 577 aaKnown RBP10.11□□□□□ -0.79
SF3B3-211ENST00000568291 ABL1P00519 1130 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 CALCAP01258 141 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 ADORA2BP29275 332 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 RPL10AP62906 217 aaKnown RBP10.11□□□□□ -0.79
SF3B3-211ENST00000568291 NOP14P78316 857 aaKnown RBP10.11□□□□□ -0.79
SF3B3-211ENST00000568291 SMARCB1Q12824 385 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 MTAPQ13126 283 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 STIM1Q13586 685 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 CFAP221Q4G0U5 840 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 CCDC40Q4G0X9 1142 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 COBLL1Q53SF7 1204 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 KRT39Q6A163 491 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 C4orf50Q6ZRC1 276 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 ELOA2Q8IYF1 753 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-211ENST00000568291 SLC2A14Q8TDB8 520 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 WHAMMQ8TF30 809 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 DEPDC1BQ8WUY9 529 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 NELL1Q92832 810 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 MED15Q96RN5 788 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 IER2Q9BTL4 223 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 TRMT61BQ9BVS5 477 aaKnown RBP10.11□□□□□ -0.79
SF3B3-211ENST00000568291 SRRTQ9BXP5 876 aaKnown RBP10.11□□□□□ -0.79
SF3B3-211ENST00000568291 ELOVL4Q9GZR5 314 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 TASP1Q9H6P5 420 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 VRTNQ9H8Y1 702 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 TMEM8AQ9HCN3 771 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 LMBRD1Q9NUN5 540 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 RAB20Q9NX57 234 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 KIAA1468Q9P260 1216 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 HSFX1Q9UBD0 423 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 ARMCX3Q9UH62 379 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-211ENST00000568291 PIAS3Q9Y6X2 628 aa10.11□□□□□ -0.79
SF3B3-211ENST00000568291 GREB1Q4ZG55 1949 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 MAN2B1O00754 1011 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 NOL4O94818 638 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 CSH1P0DML2 217 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 CSH2P0DML3 217 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 PSMC3P17980 439 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 SOX9P48436 509 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 PGFP49763 221 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 MXI1P50539 228 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 LRRC63Q05C16 580 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 TNK2Q07912 1038 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 FZD5Q13467 585 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 ARHGAP15Q53QZ3 475 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 HSP90AA4PQ58FG1 418 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 FAM35AQ86V20 835 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 ZC3H3Q8IXZ2 948 aaKnown RBP10.1□□□□□ -0.79
SF3B3-211ENST00000568291 FUKQ8N0W3 1084 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 ZNF687Q8N1G0 1237 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms