RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SHOC2Q9UQ13 582 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 UBR1Q8IWV7 1749 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 EME2A4GXA9 379 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 BCL10O95999 233 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 MAPK10P53779 464 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 PSMC6P62333 389 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 BLMHQ13867 455 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 SEL1L3Q68CR1 1132 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 RNF217Q8TC41 542 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 GLMNQ92990 594 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 EGFL8Q99944 293 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 AFF2P51816 1311 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 LIN7AO14910 233 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 KLRC4O43908 158 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 CDH2P19022 906 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 CHN2P52757 468 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 TNFAIP2Q03169 654 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 ACAP1Q15027 740 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 IL31Q6EBC2 164 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 DSTYKQ6XUX3 929 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 FAM13CQ8NE31 585 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 TAS1R2Q8TE23 839 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZFYVE19Q96K21 471 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 MMADHCQ9H3L0 296 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 ARHGEF38Q9NXL2 777 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 LINC00854A0A1B0GVQ3 168 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 TRPC5OSA6NMA1 111 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 HUS1O60921 280 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 GRK2P25098 689 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 FAM182BQ5T319 152 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 CCDC33Q8N5R6 958 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 PDCD6IPQ8WUM4 868 aaKnown RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 COPS7BQ9H9Q2 264 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 IQGAP1P46940 1657 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 FAM237BA0A1B0GVD1 139 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 DFFAO00273 331 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 CPA3P15088 417 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 GLRBP48167 497 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 STXBP2Q15833 593 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZC3H12BQ5HYM0 836 aaKnown RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 PRELID2Q8N945 189 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 RNF149Q8NC42 400 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 SH3GL1Q99961 368 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 MYRFQ9Y2G1 1151 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 E5RI56 91 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 GPD1P21695 349 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 SLC25A3Q00325 362 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 FAAP100Q0VG06 881 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 PDK3Q15120 406 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 NEDD8Q15843 81 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 UBA3Q8TBC4 463 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 EZH1Q92800 747 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 PCDH9Q9HC56 1237 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 CNGB3Q9NQW8 809 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 DAGLAQ9Y4D2 1042 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZSCAN9O15535 394 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 DCXO43602 365 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 RASSF9O75901 435 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 ANPEPP15144 967 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 TPI1P60174 286 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 MRPS22P82650 360 aaKnown RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 MAP3K10Q02779 954 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 CUL2Q13617 745 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 ITGA9Q13797 1035 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 FUT11Q495W5 492 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZNF34Q8IZ26 560 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 PPHLN1Q8NEY8 458 aaKnown RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 NR1H4Q96RI1 486 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 BBS2Q9BXC9 721 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 UTP6Q9NYH9 597 aaKnown RBP12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 TEKT2Q9UIF3 430 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 AGAP1Q9UPQ3 857 aa12.85□□□□□ -0.35
CSPG4P13-202ENST00000567704 JCADQ9P266 1359 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 MGRN1O60291 552 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 IRF2BP1Q8IU81 584 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 ETNPPLQ8TBG4 499 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 CDRT15Q96T59 188 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 TCF7L2Q9NQB0 619 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 TAS2R14Q9NYV8 317 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 ATXN10Q9UBB4 475 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZSCAN5DPP0CG00 497 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 NME5P56597 212 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 KCNK10P57789 538 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 MAPK11Q15759 364 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 GSTA3Q16772 222 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 PARP6Q2NL67 630 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 SNRNP48Q6IEG0 339 aaKnown RBP12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 KCNV1Q6PIU1 500 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 RIPOR1Q6ZS17 1223 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZNF720Q7Z2F6 126 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 KCNK18Q7Z418 384 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 P3H2Q8IVL5 708 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 PWWP2AQ96N64 755 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
CSPG4P13-202ENST00000567704 DNPEPQ9ULA0 475 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms