RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 NUCKS1Q9H1E3 243 aaKnown RBP17.72■□□□□ 0.43
CLN6-208ENST00000567060 PNPLA8Q9NP80 782 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 TMLHEQ9NVH6 421 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 ABI2Q9NYB9 513 aaPredicted RBP17.72■□□□□ 0.43
CLN6-208ENST00000567060 HMGXB4Q9UGU5 601 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 YIPF1Q9Y548 306 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.72■□□□□ 0.432e-8■■■□□ 18
CLN6-208ENST00000567060 FHOD1Q9Y613 1164 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 F8VZ95 297 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 MED7O43513 233 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 HCRTO43612 131 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 ATP2C2O75185 946 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 SEC24AO95486 1093 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 VNN2O95498 520 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 KRT5P13647 590 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 MTHFRP42898 656 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 CLCN5P51795 746 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 EPHB3P54753 998 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 SLC8A3P57103 927 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 POLR2FP61218 127 aaKnown RBP17.71■□□□□ 0.43
CLN6-208ENST00000567060 CYP27A1Q02318 531 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 PTK2Q05397 1052 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 RAPGEF1Q13905 1077 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 TRIM14Q14142 442 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 DRAP1Q14919 205 aaPredicted RBP17.71■□□□□ 0.43
CLN6-208ENST00000567060 ARHGAP44Q17R89 818 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 MGAT5BQ3V5L5 792 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 ZNF394Q53GI3 561 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 CACNA2D4Q7Z3S7 1137 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 FUKQ8N0W3 1084 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 SPATA17Q96L03 361 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 C8orf48Q96LL4 319 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 B3GNT5Q9BYG0 378 aa17.71■□□□□ 0.43
CLN6-208ENST00000567060 XPO4Q9C0E2 1151 aaKnown RBP17.71■□□□□ 0.43
CLN6-208ENST00000567060 A0A1W2PQJ5 194 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 PI15O43692 258 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 FGF19O95750 216 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 FAM200BP0CF97 657 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 NPR3P17342 541 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 ANXA13P27216 316 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 STAT1P42224 750 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 JAM2P57087 298 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 CNGA2Q16280 664 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 RARS2Q5T160 578 aaKnown RBP17.7■□□□□ 0.42
CLN6-208ENST00000567060 GJB7Q6PEY0 223 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 GPR149Q86SP6 731 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 FAM35AQ86V20 835 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 MED10Q9BTT4 135 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 UBXN6Q9BZV1 441 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 CSNK1G1Q9HCP0 422 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 DMAP1Q9NPF5 467 aaPredicted RBP17.7■□□□□ 0.42
CLN6-208ENST00000567060 AVENQ9NQS1 362 aaPredicted RBP17.7■□□□□ 0.42
CLN6-208ENST00000567060 COMMD8Q9NX08 183 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 HESX1Q9UBX0 185 aa17.7■□□□□ 0.42
CLN6-208ENST00000567060 CACNA1AO00555 2505 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 CCDC195A0A1B0GUA6 201 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 FOXN3O00409 490 aaPredicted RBP17.69■□□□□ 0.42
CLN6-208ENST00000567060 SPATA31D3P0C874 917 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 CSH1P0DML2 217 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 CSH2P0DML3 217 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 CD19P15391 556 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 BDNFP23560 247 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 SOX5P35711 763 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 BCAT1P54687 386 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 ATAT1Q5SQI0 421 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 CWF19L1Q69YN2 538 aaKnown RBP17.69■□□□□ 0.42
CLN6-208ENST00000567060 LCLAT1Q6UWP7 414 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 SPATA31D4Q6ZUB0 917 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 ZNF677Q86XU0 584 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 C12orf29Q8N999 325 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 ANKRD52Q8NB46 1076 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 SLC2A14Q8TDB8 520 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 NKD2Q969F2 451 aaPredicted RBP17.69■□□□□ 0.42
CLN6-208ENST00000567060 PSMG2Q969U7 264 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 ZNF512Q96ME7 567 aaPredicted RBP17.69■□□□□ 0.42
CLN6-208ENST00000567060 SEPT5Q99719 369 aaPredicted RBP17.69■□□□□ 0.42
CLN6-208ENST00000567060 TRIM5Q9C035 493 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 GPR88Q9GZN0 384 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 USTQ9Y2C2 406 aa17.69■□□□□ 0.42
CLN6-208ENST00000567060 EP300Q09472 2414 aaPredicted RBP17.68■□□□□ 0.42
CLN6-208ENST00000567060 RNF225M0QZC1 329 aaPredicted RBP17.68■□□□□ 0.42
CLN6-208ENST00000567060 O00370 1275 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 SETSIPP0DME0 302 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 CYP2F1P24903 491 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 GNA15P30679 374 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 GRIK1P39086 918 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 USP8P40818 1118 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 KLK7P49862 253 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 APBA1Q02410 837 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 TWF1Q12792 350 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 PPP1R26Q5T8A7 1209 aaPredicted RBP17.68■□□□□ 0.42
CLN6-208ENST00000567060 SPECC1LQ69YQ0 1117 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 PAQR9Q6ZVX9 377 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 PLCD3Q8N3E9 789 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 TDRD5Q8NAT2 981 aaKnown RBP17.68■□□□□ 0.42
CLN6-208ENST00000567060 ZNF397Q8NF99 534 aaPredicted RBP17.68■□□□□ 0.42
CLN6-208ENST00000567060 SMG7Q92540 1137 aaKnown RBP17.68■□□□□ 0.42
CLN6-208ENST00000567060 MRFAP1L1Q96HT8 127 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 DUSP16Q9BY84 665 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 ZNF518BQ9C0D4 1074 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms