RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 CDR1P51861 262 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 CDH8P55286 799 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 NOP14P78316 857 aaKnown RBP14.27□□□□□ -0.13
CLK3-218ENST00000566926 DCAF17Q5H9S7 520 aaPredicted RBP14.27□□□□□ -0.13
CLK3-218ENST00000566926 WDR44Q5JSH3 913 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 FAM78AQ5JUQ0 283 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 SCARA5Q6ZMJ2 495 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 TTC39CQ8N584 583 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 FBXL13Q8NEE6 735 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 ZSCAN18Q8TBC5 510 aaPredicted RBP14.27□□□□□ -0.13
CLK3-218ENST00000566926 DEPDC1BQ8WUY9 529 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 TRMT2BQ96GJ1 504 aaKnown RBP14.27□□□□□ -0.13
CLK3-218ENST00000566926 PCED1BQ96HM7 432 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 SHDQ96IW2 340 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 ERGIC2Q96RQ1 377 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 PRRX2Q99811 253 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 KXD1Q9BQD3 176 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 ELOVL4Q9GZR5 314 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 FAM124BQ9H5Z6 455 aaPredicted RBP14.27□□□□□ -0.13
CLK3-218ENST00000566926 TASP1Q9H6P5 420 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 ZNF334Q9HCZ1 680 aaPredicted RBP14.27□□□□□ -0.13
CLK3-218ENST00000566926 MAGED2Q9UNF1 606 aaPredicted RBP14.27□□□□□ -0.13
CLK3-218ENST00000566926 KMT2EQ8IZD2 1858 aa14.27□□□□□ -0.13
CLK3-218ENST00000566926 GTPBP10A4D1E9 387 aaKnown RBP14.26□□□□□ -0.13
CLK3-218ENST00000566926 SLC38A8A6NNN8 435 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 DPYSL4O14531 572 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 NOL4O94818 638 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 AFPP02771 609 aaKnown RBP14.26□□□□□ -0.13
CLK3-218ENST00000566926 BDNFP23560 247 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 WEE1P30291 646 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 GPC5P78333 572 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 CETN1Q12798 172 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 FIGNQ5HY92 759 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 MIIPQ5JXC2 388 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 GPR158Q5T848 1215 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 TANGO2Q6ICL3 276 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 TMC6Q7Z403 805 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 SIX5Q8N196 739 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 GPR152Q8TDT2 470 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 TAS1R2Q8TE23 839 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 MRPS31Q92665 395 aaKnown RBP14.26□□□□□ -0.13
CLK3-218ENST00000566926 MYRFLQ96LU7 910 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 RPP25Q9BUL9 199 aaKnown RBP14.26□□□□□ -0.13
CLK3-218ENST00000566926 TRMT61BQ9BVS5 477 aaKnown RBP14.26□□□□□ -0.13
CLK3-218ENST00000566926 BCO2Q9BYV7 579 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 NIF3L1Q9GZT8 377 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 OBP2AQ9NY56 170 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 DAAM1Q9Y4D1 1078 aa14.26□□□□□ -0.13
CLK3-218ENST00000566926 STK25O00506 426 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 P4HA2O15460 535 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 F11P03951 625 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 HMGA1P17096 107 aaKnown RBP14.25□□□□□ -0.13
CLK3-218ENST00000566926 PSMC3P17980 439 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 ASPAP45381 313 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 RAP1GAPP47736 663 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 GPR15P49685 360 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 CLCN5P51795 746 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 NUBP1P53384 320 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 SPOPLQ6IQ16 392 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 MFSD6LQ8IWD5 586 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 YAF2Q8IY57 180 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 SPC24Q8NBT2 197 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 ST13P5Q8NFI4 369 aaPredicted RBP14.25□□□□□ -0.13
CLK3-218ENST00000566926 IRF7Q92985 503 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 C8orf48Q96LL4 319 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 ZSWIM3Q96MP5 696 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 MED10Q9BTT4 135 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 BRD9Q9H8M2 597 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 IL21Q9HBE4 155 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 TICRRQ7Z2Z1 1910 aa14.25□□□□□ -0.13
CLK3-218ENST00000566926 HELZP42694 1942 aaKnown RBP14.24□□□□□ -0.13
CLK3-218ENST00000566926 PMM2O15305 246 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 FCARP24071 287 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 AVPR2P30518 371 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 AVPR1AP37288 418 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 PPP3CCP48454 512 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 PDE6CP51160 858 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 NDST1P52848 882 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 CYP4F8P98187 520 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 PRKCQQ04759 706 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 INCA1Q0VD86 236 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 CCDC142Q17RM4 750 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 SDHAF4Q5VUM1 108 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
CLK3-218ENST00000566926 PHLDB3Q6NSJ2 640 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 DENND5BQ6ZUT9 1274 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 ACOT1Q86TX2 421 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 CNGA4Q8IV77 575 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 ARID3BQ8IVW6 561 aaPredicted RBP14.24□□□□□ -0.13
CLK3-218ENST00000566926 CCDC112Q8NEF3 446 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 FLCNQ8NFG4 579 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 DNASE1L2Q92874 299 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 SLC35C1Q96A29 364 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 SMARCD1Q96GM5 515 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 NT5C1AQ9BXI3 368 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 B3GNT5Q9BYG0 378 aa14.24□□□□□ -0.13
CLK3-218ENST00000566926 PLA2G2FQ9BZM2 168 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms