RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 GRAP2O75791 330 aa18.63■□□□□ 0.57
HERC2-208ENST00000566635 AP1G2O75843 785 aa18.63■□□□□ 0.57
HERC2-208ENST00000566635 CTNNA1P35221 906 aaKnown RBP18.63■□□□□ 0.57
HERC2-208ENST00000566635 RNASE9P60153 205 aaKnown RBP18.63■□□□□ 0.57
HERC2-208ENST00000566635 TAP1Q03518 808 aa18.63■□□□□ 0.57
HERC2-208ENST00000566635 VARS2Q5ST30 1063 aaKnown RBP18.63■□□□□ 0.57
HERC2-208ENST00000566635 CEP57Q86XR8 500 aa18.63■□□□□ 0.57
HERC2-208ENST00000566635 C7orf61Q8IZ16 206 aa18.63■□□□□ 0.57
HERC2-208ENST00000566635 BADQ92934 168 aa18.63■□□□□ 0.57
HERC2-208ENST00000566635 SMOQ99835 787 aa18.63■□□□□ 0.57
HERC2-208ENST00000566635 MIF4GDA9UHW6 222 aaKnown RBP18.62■□□□□ 0.57
HERC2-208ENST00000566635 SYN3O14994 580 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 CTIFO43310 598 aaKnown RBP18.62■□□□□ 0.57
HERC2-208ENST00000566635 RPL34P49207 117 aaKnown RBP18.62■□□□□ 0.57
HERC2-208ENST00000566635 TSPY1Q01534 308 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 ZNF211Q13398 564 aaPredicted RBP18.62■□□□□ 0.57
HERC2-208ENST00000566635 TAF5Q15542 800 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 CCDC181Q5TID7 509 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 ZNF689Q96CS4 500 aaPredicted RBP18.62■□□□□ 0.57
HERC2-208ENST00000566635 SF3B1O75533 1304 aaKnown RBP eCLIP18.62■□□□□ 0.57
HERC2-208ENST00000566635 CEP104O60308 925 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 OAZ2O95190 189 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 TCF4P15884 667 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 CTNNA2P26232 953 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 TAS2R40P59535 323 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 CKAP4Q07065 602 aaKnown RBP18.62■□□□□ 0.57
HERC2-208ENST00000566635 ADIGQ0VDE8 80 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 TRNP1Q6NT89 227 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 UBL4BQ8N7F7 174 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 ZMIZ2Q8NF64 920 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.62■□□□□ 0.57
HERC2-208ENST00000566635 KCNK16Q96T55 309 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 PRKAG2Q9UGJ0 569 aa18.62■□□□□ 0.57
HERC2-208ENST00000566635 CTAGE15A4D2H0 777 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 F8VP50 259 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 EFCAB14O75071 495 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 CTAGE8P0CG41 777 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 BDNFP23560 247 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 MAN1A1P33908 653 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 SLC1A1P43005 524 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 PEX5P50542 639 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 SLC8A3P57103 927 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 AADACL2Q6P093 401 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 CTAGE6Q86UF2 777 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 CTAGE4Q8IX94 777 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 SMARCD1Q96GM5 515 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 PBKQ96KB5 322 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 HSFY1Q96LI6 401 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 KIAA1671Q9BY89 1806 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 CES2O00748 559 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 BAIAP3O94812 1187 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 FGFR3P22607 806 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 PSMA2P25787 234 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 FLT3P36888 993 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 SLC6A3Q01959 620 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 C2orf54Q08AI8 447 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 RTP2Q5QGT7 225 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 TEX35Q5T0J7 233 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 TAS1R1Q7RTX1 841 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 GPRIN1Q7Z2K8 1008 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 TMEM59LQ9UK28 342 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 PCDHA3Q9Y5H8 950 aa18.61■□□□□ 0.57
HERC2-208ENST00000566635 ZBBXA8MT70 800 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 GJC1P36383 396 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 EPHB4P54760 987 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 FPGSQ05932 587 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 CFAP221Q4G0U5 840 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 SLC39A12Q504Y0 691 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 NOA1Q8NC60 698 aaKnown RBP18.6■□□□□ 0.57
HERC2-208ENST00000566635 NDRG1Q92597 394 aaKnown RBP18.6■□□□□ 0.57
HERC2-208ENST00000566635 KHSRPQ92945 711 aaKnown RBP eCLIP18.6■□□□□ 0.57
HERC2-208ENST00000566635 ZCWPW1Q9H0M4 648 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 CARD9Q9H257 536 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 CYLDQ9NQC7 956 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 PATJQ8NI35 1801 aa18.6■□□□□ 0.57
HERC2-208ENST00000566635 CCDC66A2RUB6 948 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 SYN1P17600 705 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 SSR1P43307 286 aaKnown RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 ACADSBP45954 432 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 ALDH7A1P49419 539 aaKnown RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 PPIGQ13427 754 aaKnown RBP eCLIP18.59■□□□□ 0.572e-7■□□□□ 11.3
HERC2-208ENST00000566635 ERCC6LQ2NKX8 1250 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 CTXN3Q4LDR2 81 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 SPOUT1Q5T280 376 aaKnown RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 ZNF365Q70YC5 407 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 VN1R3Q9BXE9 311 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 MRPL42Q9Y6G3 142 aaKnown RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 EFCAB8A8MWE9 144 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 NDUFV1P49821 464 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 ADCY1Q08828 1119 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 MRPL58Q14197 206 aaKnown RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 BTG3Q14201 252 aaPredicted RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 PIGHQ14442 188 aaPredicted RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 ZNF280DQ6N043 979 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 CC2D1AQ6P1N0 951 aaPredicted RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 RSRC2Q7L4I2 434 aaKnown RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 ZNF572Q7Z3I7 529 aaPredicted RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 RASGEF1CQ8N431 466 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 NIPA2Q8N8Q9 360 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 FNIP1Q8TF40 1166 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms