RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 VSTM1Q6UX27 236 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 SLC47A2Q86VL8 602 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 FMNL3Q8IVF7 1028 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 SCN4BQ8IWT1 228 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 TCEAL8Q8IYN2 117 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 ZNF397Q8NF99 534 aaPredicted RBP12.16□□□□□ -0.46
KARS-207ENST00000566560 HDAC7Q8WUI4 952 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 TFAP2BQ92481 460 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 PABPC5Q96DU9 382 aaKnown RBP12.16□□□□□ -0.46
KARS-207ENST00000566560 CYFIP2Q96F07 1278 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 HNRNPABQ99729 332 aaKnown RBP12.16□□□□□ -0.46
KARS-207ENST00000566560 EDEM3Q9BZQ6 932 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 SFXN1Q9H9B4 322 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 DMAP1Q9NPF5 467 aaPredicted RBP12.16□□□□□ -0.46
KARS-207ENST00000566560 KIAA1257Q9ULG3 409 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.16□□□□□ -0.46
KARS-207ENST00000566560 SLC27A5Q9Y2P5 690 aa12.16□□□□□ -0.46
KARS-207ENST00000566560 GREB1Q4ZG55 1949 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 M0QYV0 167 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 MED7O43513 233 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 RFPL2O75678 378 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 CYP11B1P15538 503 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 FERP16591 822 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 NPR3P17342 541 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 ATF6P18850 670 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 ANXA13P27216 316 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 HOXA9P31269 272 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 CASP14P31944 242 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 GRIK1P39086 918 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 MAGEA11P43364 429 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 TUFMP49411 452 aaKnown RBP12.15□□□□□ -0.46
KARS-207ENST00000566560 GPR15P49685 360 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 BCAT1P54687 386 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 BPIFB4P59827 614 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 RPL10AP62906 217 aaKnown RBP12.15□□□□□ -0.46
KARS-207ENST00000566560 ARID5AQ03989 594 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 TWF1Q12792 350 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 COL19A1Q14993 1142 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 VEPH1Q14D04 833 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 STILQ15468 1287 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 ASIC2Q16515 512 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 SWT1Q5T5J6 900 aaKnown RBP12.15□□□□□ -0.46
KARS-207ENST00000566560 SFMBT2Q5VUG0 894 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 ANKRD54Q6NXT1 300 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 TMEM184AQ6ZMB5 413 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 PAQR9Q6ZVX9 377 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 MAFAQ8NHW3 353 aaPredicted RBP12.15□□□□□ -0.46
KARS-207ENST00000566560 EPS8L1Q8TE68 723 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 CPLX3Q8WVH0 158 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 ZSWIM1Q9BR11 485 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 ZDHHC7Q9NXF8 308 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 HESX1Q9UBX0 185 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 CAPN11Q9UMQ6 739 aa12.15□□□□□ -0.46
KARS-207ENST00000566560 LUC7L2Q9Y383 392 aaKnown RBP12.15□□□□□ -0.46
KARS-207ENST00000566560 GOLGA8CPA6NN73 597 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 F8VP50 259 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 CCL16O15467 120 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 MFAP3LO75121 409 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 XYLBO75191 536 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 MICAL2O94851 1124 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 HNRNPA1P09651 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
KARS-207ENST00000566560 CCDC172P0C7W6 258 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 CDC25BP30305 580 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 SSTR3P32745 418 aaPredicted RBP12.14□□□□□ -0.47
KARS-207ENST00000566560 ALDH1A3P47895 512 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 CACNA2D1P54289 1103 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 EPHB3P54753 998 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 SLC8A3P57103 927 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 ZBED6P86452 979 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 BST2Q10589 180 aaKnown RBP12.14□□□□□ -0.47
KARS-207ENST00000566560 ADAM15Q13444 863 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 DDR2Q16832 855 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 CTC1Q2NKJ3 1217 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 SDHAF4Q5VUM1 108 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 TAF3Q5VWG9 929 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 E4F1Q66K89 784 aaPredicted RBP12.14□□□□□ -0.47
KARS-207ENST00000566560 LCLAT1Q6UWP7 414 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 CLEC20AQ6ZU45 233 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 RTL10Q7L3V2 364 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 NOP9Q86U38 636 aaKnown RBP12.14□□□□□ -0.47
KARS-207ENST00000566560 TTC30AQ86WT1 665 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 DRC7Q8IY82 874 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 ELMOD1Q8N336 334 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 FAM117AQ9C073 453 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 NUCKS1Q9H1E3 243 aaKnown RBP12.14□□□□□ -0.47
KARS-207ENST00000566560 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 DENND4AQ7Z401 1863 aa12.14□□□□□ -0.47
KARS-207ENST00000566560 ZNF638Q14966 1978 aaKnown RBP12.14□□□□□ -0.47
KARS-207ENST00000566560 OBSL1O75147 1896 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 SETSIPP0DME0 302 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 HOXB8P17481 243 aaPredicted RBP12.13□□□□□ -0.47
KARS-207ENST00000566560 KRT9P35527 623 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 MAP3K7CLP57077 242 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 DLX2Q07687 328 aaPredicted RBP12.13□□□□□ -0.47
KARS-207ENST00000566560 CNGA2Q16280 664 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 MEA1Q16626 185 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 RARS2Q5T160 578 aaKnown RBP12.13□□□□□ -0.47
KARS-207ENST00000566560 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.13□□□□□ -0.47
KARS-207ENST00000566560 PASD1Q8IV76 773 aa12.13□□□□□ -0.47
KARS-207ENST00000566560 CNGA4Q8IV77 575 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms