RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SLC22A12Q96S37 553 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 CYP2S1Q96SQ9 504 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 TTLL2Q9BWV7 592 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 TRPM5Q9NZQ8 1165 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 GCNT4Q9P109 453 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 NME7Q9Y5B8 376 aa21.5■■□□□ 1.03
CLN6-207ENST00000566347 DMXL1Q9Y485 3027 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 C2orf78A6NCI8 922 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 F8VP50 259 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 TRDMT1O14717 391 aaKnown RBP21.49■■□□□ 1.03
CLN6-207ENST00000566347 CLSTN1O94985 981 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 TCF3P15923 654 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 HDCP19113 662 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 NDUFA8P51970 172 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 FOXK2Q01167 660 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 USP4Q13107 963 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 ZNF667Q5HYK9 610 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 TMEM196Q5HYL7 178 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 CPA6Q8N4T0 437 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 DCLK2Q8N568 766 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 GPR161Q8N6U8 529 aaKnown RBP21.49■■□□□ 1.03
CLN6-207ENST00000566347 ARL14EPQ8N8R7 260 aaPredicted RBP21.49■■□□□ 1.03
CLN6-207ENST00000566347 OSCP1Q8WVF1 389 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 DPEP3Q9H4B8 488 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 DUS2Q9NX74 493 aaKnown RBP21.49■■□□□ 1.03
CLN6-207ENST00000566347 RAB23Q9ULC3 237 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 ARHGAP26Q9UNA1 814 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 FRMD4BQ9Y2L6 1034 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 GTF3C3Q9Y5Q9 886 aa21.49■■□□□ 1.03
CLN6-207ENST00000566347 OTOL1A6NHN0 477 aaPredicted RBP21.48■■□□□ 1.03
CLN6-207ENST00000566347 CALUO43852 315 aaPredicted RBP21.48■■□□□ 1.03
CLN6-207ENST00000566347 C4BPAP04003 597 aaKnown RBP21.48■■□□□ 1.03
CLN6-207ENST00000566347 P4HA1P13674 534 aa21.48■■□□□ 1.03
CLN6-207ENST00000566347 ARSAP15289 507 aa21.48■■□□□ 1.03
CLN6-207ENST00000566347 IFNAR2P48551 515 aa21.48■■□□□ 1.03
CLN6-207ENST00000566347 USP46P62068 366 aa21.48■■□□□ 1.03
CLN6-207ENST00000566347 TMC2Q8TDI7 906 aa21.48■■□□□ 1.03
CLN6-207ENST00000566347 ATP2A3Q93084 1043 aa21.48■■□□□ 1.03
CLN6-207ENST00000566347 ATP8B3O60423 1300 aa21.48■■□□□ 1.03
CLN6-207ENST00000566347 HELZP42694 1942 aaKnown RBP21.47■■□□□ 1.03
CLN6-207ENST00000566347 A0A1W2PQ27 194 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 A0A1W2PQ64 194 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 A0A1W2PQD8 194 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 RHOBTB3O94955 611 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 HOXA6P31267 233 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 CNR2P34972 360 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 LONP2Q86WA8 852 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 TTC16Q8NEE8 873 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 SH3RF2Q8TEC5 729 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 CHAMP1Q96JM3 812 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 TNIP3Q96KP6 325 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 SLITRK1Q96PX8 696 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 B3GNT5Q9BYG0 378 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 ZNF518BQ9C0D4 1074 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 SMYD3Q9H7B4 428 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 ECT2Q9H8V3 914 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 GMEB2Q9UKD1 530 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 TRAF3IP3Q9Y228 551 aa21.47■■□□□ 1.03
CLN6-207ENST00000566347 ZNF840PA6NDX5 716 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 K7ESF4 209 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 IKBKBO14920 756 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 ATG13O75143 517 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 DRD1P21728 446 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 NR1H3Q13133 447 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 SGSM1Q2NKQ1 1148 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 ZACNQ401N2 412 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 CEP135Q66GS9 1140 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 FSTL4Q6MZW2 842 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 ERMP1Q7Z2K6 904 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 TAF4BQ92750 862 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 CHFRQ96EP1 664 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 DCHS1Q96JQ0 3298 aa21.46■■□□□ 1.03
CLN6-207ENST00000566347 CHURC1-FNTBB4DL54 471 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 MAPK13O15264 365 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 RTN3O95197 1032 aaPredicted RBP21.45■■□□□ 1.02
CLN6-207ENST00000566347 VNN1O95497 513 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 GJA4P35212 333 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 FNTBP49356 437 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 CACNA2D1P54289 1103 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 CDH8P55286 799 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 DLG4P78352 724 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 DPYDQ12882 1025 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 NFIL3Q16649 462 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 EML3Q32P44 896 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 LAIR1Q6GTX8 287 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 SCARA5Q6ZMJ2 495 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 KRBA2Q6ZNG9 492 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 NUP93Q8N1F7 819 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 KIAA1958Q8N8K9 716 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 CCDC34Q96HJ3 373 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 P2RY13Q9BPV8 354 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 WNT6Q9Y6F9 365 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 CEP250Q9BV73 2442 aa21.45■■□□□ 1.02
CLN6-207ENST00000566347 CLDN5O00501 218 aa21.44■■□□□ 1.02
CLN6-207ENST00000566347 PRR29P0C7W0 189 aa21.44■■□□□ 1.02
CLN6-207ENST00000566347 RAP1GAPP47736 663 aa21.44■■□□□ 1.02
CLN6-207ENST00000566347 SLC7A9P82251 487 aa21.44■■□□□ 1.02
CLN6-207ENST00000566347 TAF10Q12962 218 aa21.44■■□□□ 1.02
CLN6-207ENST00000566347 FBXO43Q4G163 708 aa21.44■■□□□ 1.02
CLN6-207ENST00000566347 PDZD8Q8NEN9 1154 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms