RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 SOBPA7XYQ1 873 aa22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 ANHXE9PGG2 379 aa22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 NPR3P17342 541 aa22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 MTMR3Q13615 1198 aa22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 PPP1R26Q5T8A7 1209 aaPredicted RBP22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 DPY19L2P1Q6NXN4 242 aa22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 MTSS1LQ765P7 747 aa22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 SMOQ99835 787 aa22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 PLCB1Q9NQ66 1216 aa22.32■■□□□ 1.16
SHCBP1-205ENST00000566016 TNFRSF10AO00220 468 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 NRG2O14511 850 aaPredicted RBP22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 RTN3O95197 1032 aaPredicted RBP22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 F11P03951 625 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 VDRP11473 427 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 ATP1A3P13637 1013 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 ADORA2BP29275 332 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 KCNMA1Q12791 1236 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 SGO2Q562F6 1265 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 CLEC20AQ6ZU45 233 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 TMEM150AQ86TG1 271 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 RBBP8NLQ8NC74 664 aaPredicted RBP22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 STKLD1Q8NE28 680 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 ZMIZ2Q8NF64 920 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 SHC3Q92529 594 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 KCNK16Q96T55 309 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 DUSP16Q9BY84 665 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 CBX8Q9HC52 389 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 DAAM1Q9Y4D1 1078 aa22.31■■□□□ 1.16
SHCBP1-205ENST00000566016 TNFRSF10BO14763 440 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 HTR4Q13639 388 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 STILQ15468 1287 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 TEAD2Q15562 447 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 ARHGAP15Q53QZ3 475 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 NUP93Q8N1F7 819 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 ATXN3LQ9H3M9 355 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 COMMD8Q9NX08 183 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 IL37Q9NZH6 218 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 LIMD1Q9UGP4 676 aa22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 MAGED2Q9UNF1 606 aaPredicted RBP22.3■■□□□ 1.16
SHCBP1-205ENST00000566016 HELZP42694 1942 aaKnown RBP22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 FAM92AA1XBS5 289 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 O00370 1275 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 TADA3O75528 432 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 BEST1O76090 585 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 DDX6P26196 483 aaKnown RBP eCLIP22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 WEE1P30291 646 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 PPP3CCP48454 512 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 APBA1Q02410 837 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 PTPN21Q16825 1174 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 GJB7Q6PEY0 223 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 ANKRD52Q8NB46 1076 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 ASB16Q96NS5 453 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 KCNK12Q9HB15 430 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 TRPV4Q9HBA0 871 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 NCANO14594 1321 aa22.29■■□□□ 1.16
SHCBP1-205ENST00000566016 RNF225M0QZC1 329 aaPredicted RBP22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 CD19P15391 556 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 GJA1P17302 382 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 SLC5A3P53794 718 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 MAP3K7CLP57077 242 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 USP46P62068 366 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 TPM4P67936 248 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 KLHDC7AQ5VTJ3 777 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 POTEHQ6S545 545 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 OVCA2Q8WZ82 227 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 MCRS1Q96EZ8 462 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 ERGIC2Q96RQ1 377 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 UBXN6Q9BZV1 441 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 TASP1Q9H6P5 420 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 TSPAN16Q9UKR8 245 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 SORCS3Q9UPU3 1222 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 KRT5P13647 590 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 UCHL3P15374 230 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 BCAT1P54687 386 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 SLC8A3P57103 927 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 MEA1Q16626 185 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 LRSAM1Q6UWE0 723 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 LCLAT1Q6UWP7 414 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 LUZP1Q86V48 1076 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 MRPS31Q92665 395 aaKnown RBP22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 SMARCD2Q92925 531 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 SLITRK1Q96PX8 696 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 NAA15Q9BXJ9 866 aaKnown RBP22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 FBXO44Q9H4M3 255 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 SLITRK6Q9H5Y7 841 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 DNAJC12Q9UKB3 198 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 SIK3Q9Y2K2 1263 aa22.28■■□□□ 1.16
SHCBP1-205ENST00000566016 HHLA1C9JL84 531 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 PFKLP17858 780 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 YWHAQP27348 245 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 CNGA2Q16280 664 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 TTC30AQ86WT1 665 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 PDZD8Q8NEN9 1154 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 ZSCAN18Q8TBC5 510 aaPredicted RBP22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 TFAP2BQ92481 460 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 FGF14Q92915 247 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 LSM14BQ9BX40 385 aaKnown RBP22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 HESX1Q9UBX0 185 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 MUTYHQ9UIF7 546 aa22.27■■□□□ 1.16
SHCBP1-205ENST00000566016 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms