RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 LHX1P48742 406 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 RNASE9P60153 205 aaKnown RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 PPP2R2AP63151 447 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 GPC5P78333 572 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 IFT88Q13099 833 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 UAP1Q16222 522 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CNGA2Q16280 664 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TCTN1Q2MV58 587 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TAX1BP1Q86VP1 789 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 ADGRF2Q8IZF7 708 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CRIPAKQ8N1N5 446 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CRYBG2Q8N1P7 616 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 RASGEF1CQ8N431 466 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMEM35BQ8NCS4 154 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TPCN2Q8NHX9 752 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 VCPIP1Q96JH7 1222 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TNIP3Q96KP6 325 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 CASD1Q96PB1 797 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 FAM114A2Q9NRY5 505 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TBC1D13Q9NVG8 400 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 TAS2R14Q9NYV8 317 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 PRKAG2Q9UGJ0 569 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 DSEQ9UL01 958 aa9.93□□□□□ -0.82
CNEP1R1-206ENST00000565556 LTBP2Q14767 1821 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 C5orf60A6NFR6 353 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 A8MXQ7 604 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMEM189-UBE2V1I3L0A0 370 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 KRIT1O00522 736 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 SART1O43290 800 aaKnown RBP9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 CALCAP01258 141 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 AMHP03971 560 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 ODC1P11926 461 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 CDH5P33151 784 aaPredicted RBP9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 EIF3BP55884 814 aaKnown RBP9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 CENPCQ03188 943 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 TRADDQ15628 312 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 LIN9Q5TKA1 542 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 PEX26Q7Z412 305 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMC3Q7Z5M5 1100 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 METTL23Q86XA0 190 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 PALB2Q86YC2 1186 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 CCDC50Q8IVM0 306 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 RHOT2Q8IXI1 618 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 COLGALT2Q8IYK4 626 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 CACNA2D3Q8IZS8 1091 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 UBLCP1Q8WVY7 318 aaPredicted RBP9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 KBTBD7Q8WVZ9 684 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 TFAP2BQ92481 460 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 TWNKQ96RR1 684 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 CNOT10Q9H9A5 744 aaKnown RBP9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 PPANQ9NQ55 473 aaKnown RBP9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 HMGXB4Q9UGU5 601 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 STXBP5LQ9Y2K9 1186 aa9.92□□□□□ -0.82
CNEP1R1-206ENST00000565556 NCANO14594 1321 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 M0QZQ0 153 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 GABRDO14764 452 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 RASSF9O75901 435 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 BAIAP3O94812 1187 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 DDHD2O94830 711 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 CYP11A1P05108 521 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 CSF2RAP15509 400 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 ABCB4P21439 1286 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 NOMO3P69849 1222 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 PPIGQ13427 754 aaKnown RBP eCLIP9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 TCEAL1Q15170 157 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 PPP2R5EQ16537 467 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 ODF2Q5BJF6 829 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 WSCD1Q658N2 575 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 LCLAT1Q6UWP7 414 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 SLFN11Q7Z7L1 901 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 ACOT1Q86TX2 421 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 HOOK3Q86VS8 718 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 ZNF280BQ86YH2 543 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 PHF13Q86YI8 300 aaPredicted RBP9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 C3orf58Q8NDZ4 430 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 RFFLQ8WZ73 363 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 SEC14L1Q92503 715 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 SUSD3Q96L08 255 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 ZSWIM1Q9BR11 485 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMEM175Q9BSA9 504 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 THAP2Q9H0W7 228 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 IL23AQ9NPF7 189 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 KLC4Q9NSK0 619 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 GTF3C4Q9UKN8 822 aa9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 UTP11Q9Y3A2 253 aaKnown RBP9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 FNDC1Q4ZHG4 1894 aaPredicted RBP9.91□□□□□ -0.82
CNEP1R1-206ENST00000565556 TBKBP1A7MCY6 615 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 O00370 1275 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 ALDH2P05091 517 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 CALB1P05937 261 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 TYMPP19971 482 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 PCSK1P29120 753 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 OR1G1P47890 313 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 HADHBP55084 474 aaKnown RBP9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 CLUL1Q15846 466 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 KRT71Q3SY84 523 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 TIGD5Q53EQ6 642 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 ARHGAP17Q68EM7 881 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 PASD1Q8IV76 773 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms