RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 DHX58Q96C10 678 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 CNTNAP3BQ96NU0 1288 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 HHIPQ96QV1 700 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 BACH2Q9BYV9 841 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 CNTNAP3Q9BZ76 1288 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 LRRC27Q9C0I9 530 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 RNF38Q9H0F5 515 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 XYLT2Q9H1B5 865 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 ARRDC1-AS1Q9H2J1 176 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 EBF1Q9UH73 591 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 SLC8A2Q9UPR5 921 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 ATG2BQ96BY7 2078 aa9.17□□□□□ -0.94
CAPN3-213ENST00000565173 EML5Q05BV3 1969 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 PTPRDP23468 1912 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 K7EQS6 105 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 LEFTY2O00292 366 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 CLIC2O15247 247 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 POLR2DO15514 142 aaKnown RBP9.16□□□□□ -0.94
CAPN3-213ENST00000565173 FOXD2O60548 495 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-213ENST00000565173 CUTAO60888 179 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 AKAP3O75969 853 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 EPN2O95208 641 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 YEATS4O95619 227 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 STAU1O95793 577 aaKnown RBP9.16□□□□□ -0.94
CAPN3-213ENST00000565173 OLFM2O95897 454 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 ADRB1P08588 477 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 ZNF806P0C7X5 589 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 DLATP10515 647 aaKnown RBP9.16□□□□□ -0.94
CAPN3-213ENST00000565173 PFKLP17858 780 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 PTPN1P18031 435 aaKnown RBP9.16□□□□□ -0.94
CAPN3-213ENST00000565173 TNNI1P19237 187 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 OPRD1P41143 372 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 IFNAR2P48551 515 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 LIMK1P53667 647 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 ASIC1P78348 528 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 SLC7A9P82251 487 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 AMPD3Q01432 767 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 CYP27A1Q02318 531 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 SF3A2Q15428 464 aaKnown RBP9.16□□□□□ -0.94
CAPN3-213ENST00000565173 BMT2Q1RMZ1 405 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 MDH1BQ5I0G3 518 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 FAM26FQ5R3K3 315 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 DENND5BQ6ZUT9 1274 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 UNC13DQ70J99 1090 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 NELFCDQ8IXH7 590 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 C12orf56Q8IXR9 622 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 ADGRG2Q8IZP9 1017 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 RPLP0P6Q8NHW5 317 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 CCDC127Q96BQ5 260 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 C8orf48Q96LL4 319 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 MMS19Q96T76 1030 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 CGRRF1Q99675 332 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 DPEP3Q9H4B8 488 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 TRPM5Q9NZQ8 1165 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 R3HCC1Q9Y3T6 440 aaKnown RBP9.16□□□□□ -0.94
CAPN3-213ENST00000565173 ACACBO00763 2458 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 CHD8Q9HCK8 2581 aa9.16□□□□□ -0.94
CAPN3-213ENST00000565173 SDK1Q7Z5N4 2213 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 UBE4BO95155 1302 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 F8VP50 259 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 DCLK1O15075 740 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 CHRM1P11229 460 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-213ENST00000565173 PPP3CCP48454 512 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 CYP2J2P51589 502 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 MYL6P60660 151 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 SNRPFP62306 86 aaKnown RBP9.15□□□□□ -0.94
CAPN3-213ENST00000565173 CLDN10P78369 228 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 MESP2Q0VG99 397 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 TAF10Q12962 218 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 CUL4BQ13620 913 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 DMC1Q14565 340 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 KCNB1Q14721 858 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 WDR72Q3MJ13 1102 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 PLK5Q496M5 336 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 PPM1JQ5JR12 505 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 PAQR9Q6ZVX9 377 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 SFTPA1Q8IWL2 248 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 KIAA1958Q8N8K9 716 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 XXYLT1Q8NBI6 393 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 TTC16Q8NEE8 873 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 PLEKHO2Q8TD55 490 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 USP33Q8TEY7 942 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 ZNF396Q96N95 335 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-213ENST00000565173 FNBP1Q96RU3 617 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 B3GNT5Q9BYG0 378 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 ZNF518BQ9C0D4 1074 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 DUSP15Q9H1R2 295 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-213ENST00000565173 BLZF1Q9H2G9 400 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 SNX25Q9H3E2 840 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 SMOC1Q9H4F8 434 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 SLC39A2Q9NP94 309 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 PCDHGA5Q9Y5G8 931 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 RALGAPA1Q6GYQ0 2036 aa9.15□□□□□ -0.94
CAPN3-213ENST00000565173 MYO16Q9Y6X6 1858 aa9.15□□□□□ -0.95
CAPN3-213ENST00000565173 KIAA1549LQ6ZVL6 1849 aa9.15□□□□□ -0.95
CAPN3-213ENST00000565173 TPRP12270 2363 aaKnown RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 ZZEF1O43149 2961 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 A0A0A0MRY4 1105 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 PVALEFA0A1B0GWK0 134 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms