RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TRIM11Q96F44 468 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 MFSD14AQ96MC6 490 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 ZDHHC15Q96MV8 337 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 EHMT1Q9H9B1 1298 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 ANGPTL2Q9UKU9 493 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 VNN1O95497 513 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 GSTA2P09210 222 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 CDKN2BP42772 138 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 NCKAP1LP55160 1127 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 RAVER2Q9HCJ3 691 aaKnown RBP21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 ZNRF3Q9ULT6 936 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 SHOC2Q9UQ13 582 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 ZNF541Q9H0D2 1346 aa21.41■■□□□ 1.02
MAP1LC3B-206ENST00000564844 LYPLA1O75608 230 aaPredicted RBP21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 IL1R2P27930 398 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 SCNN1BP51168 640 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 C6orf163Q5TEZ5 329 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 MEX3CQ5U5Q3 659 aaKnown RBP21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 RFX6Q8HWS3 928 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 ZNF668Q96K58 619 aaPredicted RBP21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 TIPINQ9BVW5 301 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 PHACTR1Q9C0D0 580 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 PCDH9Q9HC56 1237 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 AGO4Q9HCK5 861 aaKnown RBP21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 SPECC1L-ADORA2AF8WAN1 911 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 I3L4J1 428 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 GMPRP36959 345 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 ATXN3P54252 364 aaPredicted RBP21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 MMRN1Q13201 1228 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 SFT2D3Q587I9 215 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 MROH9Q5TGP6 573 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 SATL1Q86VE3 508 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 SPATA16Q9BXB7 569 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 GABBR1Q9UBS5 961 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 TMEM191CA6NGB0 347 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 TM9SF1O15321 606 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 TMEM191BP0C7N4 346 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 ACO1P21399 889 aaKnown RBP21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 RFC1P35251 1148 aaPredicted RBP21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 ZNF200P98182 395 aaPredicted RBP21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 DEUP1Q05D60 604 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 TCHHL1Q5QJ38 904 aaPredicted RBP21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 SP8Q8IXZ3 490 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 TMEM143Q96AN5 459 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 TRAPPC9Q96Q05 1148 aa21.4■■□□□ 1.02
MAP1LC3B-206ENST00000564844 TOM1L1O75674 476 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 RAD17O75943 681 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 PSMA2P25787 234 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 SERPINB6P35237 376 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 PDE1BQ01064 536 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 ASPHQ12797 758 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 PTP4A2Q12974 167 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 KLHL38Q2WGJ6 581 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 C16orf46Q6P387 395 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 DENND5BQ6ZUT9 1274 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 POLNQ7Z5Q5 900 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 TMPRSS6Q8IU80 811 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 IWS1Q96ST2 819 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 FOXP3Q9BZS1 431 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 SNCAIPQ9Y6H5 919 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 MYOCOSA0A1B0GUC4 107 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 CST3P01034 146 aaPredicted RBP21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 ETV4P43268 484 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 SLC18A1P54219 525 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 AP2B1P63010 937 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 DLG1Q12959 904 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 NCOA4Q13772 614 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 SLC5A9Q2M3M2 681 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.39■■□□□ 1.011e-7■□□□□ 9.4
MAP1LC3B-206ENST00000564844 LIN52Q52LA3 116 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 CMPK2Q5EBM0 449 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 CEP128Q6ZU80 1094 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 NAT8LQ8N9F0 302 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 JOSD2Q8TAC2 188 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 CERKQ8TCT0 537 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 PDP2Q9P2J9 529 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 SCINQ9Y6U3 715 aa21.39■■□□□ 1.01
MAP1LC3B-206ENST00000564844 NUDCD3Q8IVD9 361 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 ARHGAP24Q8N264 748 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 PPP1R14CQ8TAE6 165 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 ZFAND2BQ8WV99 257 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 SLC9A2Q9UBY0 812 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 FARP1Q9Y4F1 1045 aaPredicted RBP21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 IQANK1A0A1B0GTG1 560 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 HNRNPCL1O60812 293 aaKnown RBP21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 CHRNA5P30532 468 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 GRIA2P42262 883 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 AQP4P55087 323 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 RAB6CQ53S08 254 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 GPAT2Q6NUI2 795 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 ZNF398Q8TD17 642 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 APOPT1Q96IL0 206 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 RAB6CQ9H0N0 254 aa21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 PIH1D1Q9NWS0 290 aaKnown RBP21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 SEPT9Q9UHD8 586 aaPredicted RBP21.38■■□□□ 1.01
MAP1LC3B-206ENST00000564844 RBP3P10745 1247 aa21.37■■□□□ 1.01
MAP1LC3B-206ENST00000564844 CD19P15391 556 aa21.37■■□□□ 1.01
MAP1LC3B-206ENST00000564844 PEX2P28328 305 aa21.37■■□□□ 1.01
MAP1LC3B-206ENST00000564844 MSX2P35548 267 aaPredicted RBP21.37■■□□□ 1.01
MAP1LC3B-206ENST00000564844 BPIFB4P59827 614 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms