RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 POU2F2P09086 479 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 GPD2P43304 727 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 EPHB3P54753 998 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 BPIFB4P59827 614 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 USP46P62068 366 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 RPL10AP62906 217 aaKnown RBP13.19□□□□□ -0.3
KARS-204ENST00000564578 ARID5AQ03989 594 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 ITIH3Q06033 890 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 ELMSAN1Q6PJG2 1045 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 GPRIN1Q7Z2K8 1008 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 WDTC1Q8N5D0 677 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 SLC35F5Q8WV83 523 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 TRIM66O15016 1216 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 ADCY5O95622 1261 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 CHRNB2P17787 502 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 NTHL1P78549 312 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 ZBED6P86452 979 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 STILQ15468 1287 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 DENND1BQ6P3S1 775 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
KARS-204ENST00000564578 TMC8Q8IU68 726 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 SCAMP5Q8TAC9 235 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
KARS-204ENST00000564578 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 SUSD6Q92537 303 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 SMG7Q92540 1137 aaKnown RBP13.19□□□□□ -0.3
KARS-204ENST00000564578 IQCDQ96DY2 449 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 CEP295NLQ96MC4 621 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 SYT11Q9BT88 431 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 GRPEL1Q9HAV7 217 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 CYTH4Q9UIA0 394 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 CD207Q9UJ71 328 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 PCDHGC3Q9UN70 934 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 COG5Q9UP83 839 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 LUC7L2Q9Y383 392 aaKnown RBP13.19□□□□□ -0.3
KARS-204ENST00000564578 ATP8B3O60423 1300 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 NOTCH4Q99466 2003 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 C2orf16Q68DN1 1984 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 GRXCR2A6NFK2 248 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 CCR2P41597 374 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 BCAT1P54687 386 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
KARS-204ENST00000564578 MEA1Q16626 185 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 PMF1Q6P1K2 205 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 TMC6Q7Z403 805 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 MYRFLQ96LU7 910 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 ZNF334Q9HCZ1 680 aaPredicted RBP13.18□□□□□ -0.3
KARS-204ENST00000564578 PNPLA8Q9NP80 782 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 IL37Q9NZH6 218 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 HESX1Q9UBX0 185 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 ASB3Q9Y575 518 aa13.18□□□□□ -0.3
KARS-204ENST00000564578 GOLGA6L3A6NEY3 463 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 SLC38A8A6NNN8 435 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 M0QYV0 167 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 MED7O43513 233 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 XYLBO75191 536 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 RHOP08100 348 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 MMEP08473 750 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 KRT9P35527 623 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 PLA2G4AP47712 749 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 PDE6CP51160 858 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 SLC5A3P53794 718 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 EPHA5P54756 1037 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 GOLGA8FQ08AF8 430 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 GOLGA8DPQ0D2H9 430 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 PLD1Q13393 1074 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 ARID5BQ14865 1188 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 SLC5A9Q2M3M2 681 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 LEXMQ3ZCV2 418 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 HGSNATQ68CP4 663 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 CYP26C1Q6V0L0 522 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 DENND5BQ6ZUT9 1274 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 GAREM2Q75VX8 874 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 TMEM150AQ86TG1 271 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 SYN2Q92777 582 aaPredicted RBP13.17□□□□□ -0.3
KARS-204ENST00000564578 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
KARS-204ENST00000564578 ZNF512Q96ME7 567 aaPredicted RBP13.17□□□□□ -0.3
KARS-204ENST00000564578 CORO1BQ9BR76 489 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 UBXN6Q9BZV1 441 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 LHX5Q9H2C1 402 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 IL21Q9HBE4 155 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
KARS-204ENST00000564578 MYH10P35580 1976 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 GREB1Q4ZG55 1949 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 FAM92AA1XBS5 289 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 XPO1O14980 1071 aaKnown RBP13.17□□□□□ -0.3
KARS-204ENST00000564578 MBTPS2O43462 519 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 SETSIPP0DME0 302 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 CSH1P0DML2 217 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 CSH2P0DML3 217 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 FERP16591 822 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 PTPN2P17706 415 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 HNRNPH3P31942 346 aaKnown RBP13.17□□□□□ -0.3
KARS-204ENST00000564578 PRKCIP41743 596 aa13.17□□□□□ -0.3
KARS-204ENST00000564578 ADKP55263 362 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms