RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 ARID5AQ03989 594 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 TMEM62Q0P6H9 643 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 MYO1EQ12965 1108 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 TCEAL1Q15170 157 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 LRRC41Q15345 812 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ACCSLQ4AC99 568 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 CCDC38Q502W7 563 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 KIAA1755Q5JYT7 1200 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 HYIQ5T013 277 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 C12orf60Q5U649 245 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 DUPD1Q68J44 220 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 CDCA2Q69YH5 1023 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ALKBH5Q6P6C2 394 aaKnown RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 BZW1Q7L1Q6 419 aaKnown RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ZNF571Q7Z3V5 609 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 FRMD5Q7Z6J6 570 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 DAAM2Q86T65 1068 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 TBC1D1Q86TI0 1168 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 NT5DC3Q86UY8 548 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 LDHDQ86WU2 507 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 JAMLQ86YT9 394 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 APLFQ8IW19 511 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 TMEFF1Q8IYR6 380 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ZNF444Q8N0Y2 327 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 TEX9Q8N6V9 391 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 MDM1Q8TC05 714 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ATP8B4Q8TF62 1192 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ZNF384Q8TF68 577 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 NSMCE1Q8WV22 266 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 TCP11Q8WWU5 503 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 DDX17Q92841 729 aaKnown RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 DACT3Q96B18 629 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 DNAJC19Q96DA6 116 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 HES6Q96HZ4 224 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 C20orf173Q96LM9 149 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 RUNDC3BQ96NL0 473 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 NAP1L4Q99733 375 aaKnown RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ELAC2Q9BQ52 826 aaKnown RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 TMEM47Q9BQJ4 181 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ERP44Q9BS26 406 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ROPN1BQ9BZX4 212 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 CARD9Q9H257 536 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ZCCHC4Q9H5U6 513 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 NOL6Q9H6R4 1146 aaKnown RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 AZI2Q9H6S1 392 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ECT2Q9H8V3 914 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ROPN1Q9HAT0 212 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ZNF287Q9HBT7 754 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 SPATS2LQ9NUQ6 558 aaKnown RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 MCM9Q9NXL9 1143 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 MTRF1LQ9UGC7 380 aaKnown RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 HDAC9Q9UKV0 1011 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 EFR3BQ9Y2G0 817 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 ATP8A1Q9Y2Q0 1164 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 SF3B6Q9Y3B4 125 aaKnown RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 DAAM1Q9Y4D1 1078 aa5.05□□□□□ -1.6
CAPN3-212ENST00000564503 USP15Q9Y4E8 981 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-212ENST00000564503 SMCHD1A6NHR9 2005 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 FRMD3A2A2Y4 597 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 KLRF2D3W0D1 207 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 PODXLO00592 558 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 SLC16A3O15427 465 aaKnown RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 CALUO43852 315 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 SH3BP5O60239 455 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 SNX3O60493 162 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 PHF2O75151 1096 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 GGPS1O95749 300 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 VIMP08670 466 aaKnown RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 ITGA4P13612 1032 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 UCHL3P15374 230 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 CHRNA3P32297 505 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 GCKP35557 465 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 STAT1P42224 750 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 SKIV2L2P42285 1042 aaKnown RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 SOX9P48436 509 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 CCNG1P51959 295 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 EIF6P56537 245 aaKnown RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 JAM2P57087 298 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 EVA1CP58658 441 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 MAP2K1Q02750 393 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 PPATQ06203 517 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 KLRC3Q07444 240 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 ADAM9Q13443 819 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 PLS1Q14651 629 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 EXOC3L4Q17RC7 722 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 SLC35G1Q2M3R5 365 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 GNPTABQ3T906 1256 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 GALNTL6Q49A17 601 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 FAM133BQ5BKY9 247 aaKnown RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 CMPK2Q5EBM0 449 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 TNFAIP8L3Q5GJ75 292 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 NAIF1Q69YI7 327 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 CAPRIN2Q6IMN6 1127 aaKnown RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 DPY19L2P1Q6NXN4 242 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 MIS18BP1Q6P0N0 1132 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 RPTNQ6XPR3 784 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 PNMA8AQ86V59 439 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 IGDCC3Q8IVU1 814 aa5.04□□□□□ -1.6
CAPN3-212ENST00000564503 MARCH10Q8NA82 808 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-212ENST00000564503 AGAP11Q8TF27 550 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms