RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 ELOVL4Q9GZR5 314 aa17.85■□□□□ 0.45
CCNF-203ENST00000564236 USP25Q9UHP3 1055 aa17.85■□□□□ 0.45
CCNF-203ENST00000564236 ZNF840PA6NDX5 716 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 TULP1O00294 542 aaPredicted RBP17.84■□□□□ 0.45
CCNF-203ENST00000564236 PDGFRBP09619 1106 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 PTPN1P18031 435 aaKnown RBP17.84■□□□□ 0.45
CCNF-203ENST00000564236 HDCP19113 662 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 GRIK1P39086 918 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 MYL6P60660 151 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 TNNC1P63316 161 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 SLC7A9P82251 487 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 ZXDBP98169 803 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 CYP27A1Q02318 531 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 DNM1Q05193 864 aaKnown RBP17.84■□□□□ 0.45
CCNF-203ENST00000564236 STK4Q13043 487 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 KCNB1Q14721 858 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 FOXD4L5Q5VV16 416 aaPredicted RBP17.84■□□□□ 0.45
CCNF-203ENST00000564236 PKN3Q6P5Z2 889 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 CEP57L1Q8IYX8 460 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 CAMKK1Q8N5S9 505 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 KIAA0895Q8NCT3 520 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 FOXD4L4Q8WXT5 416 aaPredicted RBP17.84■□□□□ 0.45
CCNF-203ENST00000564236 P2RY13Q9BPV8 354 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 SNX25Q9H3E2 840 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 KCTD10Q9H3F6 313 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 FBRSL1Q9HCM7 1045 aaKnown RBP17.84■□□□□ 0.45
CCNF-203ENST00000564236 TRPC7Q9HCX4 862 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 TMEM30AQ9NV96 361 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 DUS2Q9NX74 493 aaKnown RBP17.84■□□□□ 0.45
CCNF-203ENST00000564236 HPSEQ9Y251 543 aa17.84■□□□□ 0.45
CCNF-203ENST00000564236 FAM237AA0A1B0GTK4 181 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 F8VP50 259 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 EXOC3O60645 756 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 AKAP3O75969 853 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 OAS1P00973 400 aaKnown RBP17.83■□□□□ 0.44
CCNF-203ENST00000564236 EGFP01133 1207 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 C4BPAP04003 597 aaKnown RBP17.83■□□□□ 0.44
CCNF-203ENST00000564236 HSP90AA1P07900 732 aaKnown RBP17.83■□□□□ 0.44
CCNF-203ENST00000564236 CMA1P23946 247 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 ANXA13P27216 316 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 AFMP43652 599 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 GALK1P51570 392 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 MDH1BQ5I0G3 518 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 TDRD10Q5VZ19 366 aaKnown RBP17.83■□□□□ 0.44
CCNF-203ENST00000564236 B3GALNT2Q8NCR0 500 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 OR6B3Q8NGW1 331 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 SH3RF2Q8TEC5 729 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 EZH1Q92800 747 aaPredicted RBP17.83■□□□□ 0.44
CCNF-203ENST00000564236 PAGE5Q96GU1 130 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 TRPM5Q9NZQ8 1165 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 SERTAD1Q9UHV2 236 aa17.83■□□□□ 0.44
CCNF-203ENST00000564236 FOXD2O60548 495 aaPredicted RBP17.82■□□□□ 0.44
CCNF-203ENST00000564236 IFNAR2P48551 515 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 CACNA2D1P54289 1103 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 TRPC3Q13507 836 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 CSRP2Q16527 193 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 FOXD4L6Q3SYB3 417 aaPredicted RBP17.82■□□□□ 0.44
CCNF-203ENST00000564236 FOXD4L3Q6VB84 417 aaPredicted RBP17.82■□□□□ 0.44
CCNF-203ENST00000564236 GRAMD1CQ8IYS0 662 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 OVCA2Q8WZ82 227 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 CD101Q93033 1021 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 LOXL4Q96JB6 756 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 DUSP9Q99956 384 aaKnown RBP17.82■□□□□ 0.44
CCNF-203ENST00000564236 DPEP3Q9H4B8 488 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 IL37Q9NZH6 218 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 WNT6Q9Y6F9 365 aa17.82■□□□□ 0.44
CCNF-203ENST00000564236 PTPRDP23468 1912 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 GREB1Q4ZG55 1949 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 MED19A0JLT2 244 aaPredicted RBP17.81■□□□□ 0.44
CCNF-203ENST00000564236 LRRIQ3A6PVS8 624 aaPredicted RBP17.81■□□□□ 0.44
CCNF-203ENST00000564236 A8MXQ7 604 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 PDXKO00764 312 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 RNF40O75150 1001 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 CASP4P49662 377 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 ATXN1P54253 815 aaKnown RBP17.81■□□□□ 0.44
CCNF-203ENST00000564236 SPEM2Q0P670 501 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 NR1H3Q13133 447 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 SRSF5Q13243 272 aaKnown RBP17.81■□□□□ 0.44
CCNF-203ENST00000564236 SNX30Q5VWJ9 437 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 NAIF1Q69YI7 327 aaPredicted RBP17.81■□□□□ 0.44
CCNF-203ENST00000564236 PRR23BQ6ZRT6 265 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 SYT13Q7L8C5 426 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 CCDC26Q8TAB7 109 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 GAB3Q8WWW8 586 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 RTKNQ9BST9 563 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 B3GNT5Q9BYG0 378 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 ZNF518BQ9C0D4 1074 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 EXOC1Q9NV70 894 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 USP18Q9UMW8 372 aa17.81■□□□□ 0.44
CCNF-203ENST00000564236 FAM92AA1XBS5 289 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 LEFTY2O00292 366 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 IKBKBO14920 756 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 MAPK13O15264 365 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 VNN1O95497 513 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 NFATC1O95644 943 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 PFKFB1P16118 471 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 HOXC13P31276 330 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 RAP1GAPP47736 663 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 NCOA4Q13772 614 aa17.8■□□□□ 0.44
CCNF-203ENST00000564236 LPAL2Q16609 132 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms