RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 PARP2Q9UGN5 583 aa10.33□□□□□ -0.76
UBFD1-203ENST00000564106 GTF3C4Q9UKN8 822 aa10.33□□□□□ -0.76
UBFD1-203ENST00000564106 KIAA1257Q9ULG3 409 aa10.33□□□□□ -0.76
UBFD1-203ENST00000564106 GIT1Q9Y2X7 761 aa10.33□□□□□ -0.76
UBFD1-203ENST00000564106 HYOU1Q9Y4L1 999 aa10.33□□□□□ -0.76
UBFD1-203ENST00000564106 CAPN6Q9Y6Q1 641 aa10.33□□□□□ -0.76
UBFD1-203ENST00000564106 DUSP10Q9Y6W6 482 aa10.33□□□□□ -0.76
UBFD1-203ENST00000564106 CASTOR2A6NHX0 329 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 CES2O00748 559 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 DYNC1I1O14576 645 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 BUB1O43683 1085 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 MTA2O94776 668 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 KIF4AO95239 1232 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 ABL1P00519 1130 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 FTLP02792 175 aaPredicted RBP10.32□□□□□ -0.76
UBFD1-203ENST00000564106 HOXB8P17481 243 aaPredicted RBP10.32□□□□□ -0.76
UBFD1-203ENST00000564106 CHRNB2P17787 502 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 ABCB4P21439 1286 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 CENPCQ03188 943 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 SOX4Q06945 474 aaPredicted RBP10.32□□□□□ -0.76
UBFD1-203ENST00000564106 INCA1Q0VD86 236 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 TCF15Q12870 199 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 GLRA4Q5JXX5 417 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 LIN9Q5TKA1 542 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 ACAD10Q6JQN1 1059 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 POTEHQ6S545 545 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 ALYREFQ86V81 257 aaKnown RBP10.32□□□□□ -0.76
UBFD1-203ENST00000564106 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 CXorf38Q8TB03 319 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 FAM84AQ96KN4 292 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 GOLGA2P5Q9HBQ8 144 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 RXFP1Q9HBX9 757 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 AVENQ9NQS1 362 aaPredicted RBP10.32□□□□□ -0.76
UBFD1-203ENST00000564106 MAN1C1Q9NR34 630 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 CHST7Q9NS84 486 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 RNF14Q9UBS8 474 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 LIMD1Q9UGP4 676 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 TFR2Q9UP52 801 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 SCINQ9Y6U3 715 aa10.32□□□□□ -0.76
UBFD1-203ENST00000564106 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 EFCAB8A8MWE9 144 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 TMCO5BA8MYB1 307 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-203ENST00000564106 FANCGO15287 622 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 CTIFO43310 598 aaKnown RBP10.31□□□□□ -0.76
UBFD1-203ENST00000564106 NARSO43776 548 aaKnown RBP10.31□□□□□ -0.76
UBFD1-203ENST00000564106 PALMO75781 387 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 CYP1A1P04798 512 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-203ENST00000564106 ALDH2P05091 517 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 FAM163BP0C2L3 166 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 UNGP13051 313 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-203ENST00000564106 CD58P19256 250 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 GLUD2P49448 558 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 TAF6P49848 677 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 AMPD2Q01433 879 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 DSG1Q02413 1049 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
UBFD1-203ENST00000564106 SIGLEC14Q08ET2 396 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 C9orf57Q5W0N0 161 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 C11orf63Q6NUN7 778 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 FUT10Q6P4F1 479 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 RSPO2Q6UXX9 243 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-203ENST00000564106 SCARA5Q6ZMJ2 495 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 DPH6Q7L8W6 267 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 BMP8AQ7Z5Y6 402 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 GPR149Q86SP6 731 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 UNC93AQ86WB7 457 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 PALB2Q86YC2 1186 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 TMEM35BQ8NCS4 154 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 TPCN2Q8NHX9 752 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 SLC35G2Q8TBE7 412 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 RSAD2Q8WXG1 361 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 RSPH1Q8WYR4 309 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 PBXIP1Q96AQ6 731 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 ZNF653Q96CK0 615 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 FAM193BQ96PV7 902 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-203ENST00000564106 MMS19Q96T76 1030 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 MIS12Q9H081 205 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 THAP2Q9H0W7 228 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 MRPL47Q9HD33 250 aaKnown RBP10.31□□□□□ -0.76
UBFD1-203ENST00000564106 FAM86C1Q9NVL1 165 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 CTTNBP2NLQ9P2B4 639 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 STRIP2Q9ULQ0 834 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 SNX12Q9UMY4 172 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 SCN1AP35498 2009 aa10.31□□□□□ -0.76
UBFD1-203ENST00000564106 VPS13AQ96RL7 3174 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 ARHGEF37A1IGU5 675 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 GRID2IPA4D2P6 1211 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 MIF4GDA9UHW6 222 aaKnown RBP10.3□□□□□ -0.76
UBFD1-203ENST00000564106 I3L4J1 428 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 TGM5O43548 720 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 CILPO75339 1184 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 ATP1A1P05023 1023 aaKnown RBP10.3□□□□□ -0.76
UBFD1-203ENST00000564106 CYP1A2P05177 515 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 CALB1P05937 261 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 THP07101 528 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 VDRP11473 427 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 KLRC2P26717 231 aa10.3□□□□□ -0.76
UBFD1-203ENST00000564106 LRPAP1P30533 357 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms