RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 SEC13P55735 322 aa22.31■■□□□ 1.16
HERC2-204ENST00000563945 AMPD3Q01432 767 aa22.31■■□□□ 1.16
HERC2-204ENST00000563945 RESTQ13127 1097 aa22.31■■□□□ 1.16
HERC2-204ENST00000563945 SLC39A14Q15043 492 aa22.31■■□□□ 1.16
HERC2-204ENST00000563945 TTC30AQ86WT1 665 aa22.31■■□□□ 1.16
HERC2-204ENST00000563945 FNBP1Q96RU3 617 aa22.31■■□□□ 1.16
HERC2-204ENST00000563945 FGFBP2Q9BYJ0 223 aa22.31■■□□□ 1.16
HERC2-204ENST00000563945 INVSQ9Y283 1065 aa22.31■■□□□ 1.16
HERC2-204ENST00000563945 MAP1BP46821 2468 aaKnown RBP22.31■■□□□ 1.16
HERC2-204ENST00000563945 BCLAF3A2AJT9 711 aaKnown RBP22.3■■□□□ 1.16
HERC2-204ENST00000563945 LEFTY2O00292 366 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 TM4SF5O14894 197 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 ALDH1A2O94788 518 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 TNNI1P19237 187 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 SYT1P21579 422 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 WARSP23381 471 aaKnown RBP22.3■■□□□ 1.16
HERC2-204ENST00000563945 DAB2IPQ5VWQ8 1189 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 TDRD10Q5VZ19 366 aaKnown RBP22.3■■□□□ 1.16
HERC2-204ENST00000563945 CBWD2Q8IUF1 395 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 WDR49Q8IV35 697 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 OR6B3Q8NGW1 331 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 MYCBPAPQ8TBZ2 947 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 KBTBD7Q8WVZ9 684 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 EDEM2Q9BV94 578 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 LSM14BQ9BX40 385 aaKnown RBP22.3■■□□□ 1.16
HERC2-204ENST00000563945 CRTAC1Q9NQ79 661 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 HSPBP1Q9NZL4 362 aa22.3■■□□□ 1.16
HERC2-204ENST00000563945 KCNK5O95279 499 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 CENPBP07199 599 aaPredicted RBP22.29■■□□□ 1.16
HERC2-204ENST00000563945 TNNC1P63316 161 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 STK38Q15208 465 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 MDH1BQ5I0G3 518 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 TCEAL6Q6IPX3 200 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 TRAPPC11Q7Z392 1133 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 RDH13Q8NBN7 331 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 USP33Q8TEY7 942 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 EZH1Q92800 747 aaPredicted RBP22.29■■□□□ 1.16
HERC2-204ENST00000563945 TCEAL3Q969E4 200 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 SLITRK1Q96PX8 696 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 USP28Q96RU2 1077 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 TPSD1Q9BZJ3 242 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 TNMDQ9H2S6 317 aa22.29■■□□□ 1.16
HERC2-204ENST00000563945 ZSCAN16Q9H4T2 348 aaPredicted RBP22.29■■□□□ 1.16
HERC2-204ENST00000563945 CIZ1Q9ULV3 898 aaPredicted RBP22.29■■□□□ 1.16
HERC2-204ENST00000563945 KHNYNO15037 678 aaKnown RBP22.28■■□□□ 1.16
HERC2-204ENST00000563945 DLATP10515 647 aaKnown RBP22.28■■□□□ 1.16
HERC2-204ENST00000563945 PMLP29590 882 aa22.28■■□□□ 1.16
HERC2-204ENST00000563945 TRPC3Q13507 836 aa22.28■■□□□ 1.16
HERC2-204ENST00000563945 ANO7Q6IWH7 933 aa22.28■■□□□ 1.16
HERC2-204ENST00000563945 LIMS2Q7Z4I7 341 aa22.28■■□□□ 1.16
HERC2-204ENST00000563945 FILIP1Q7Z7B0 1213 aa22.28■■□□□ 1.16
HERC2-204ENST00000563945 CCDC33Q8N5R6 958 aa22.28■■□□□ 1.16
HERC2-204ENST00000563945 PCED1BQ96HM7 432 aa22.28■■□□□ 1.16
HERC2-204ENST00000563945 CPQQ9Y646 472 aa22.28■■□□□ 1.16
HERC2-204ENST00000563945 KMT2BQ9UMN6 2715 aaPredicted RBP22.28■■□□□ 1.16
HERC2-204ENST00000563945 ZNF840PA6NDX5 716 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 C4orf47A7E2U8 309 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 F8VP50 259 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 CLSTN1O94985 981 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 FAM163BP0C2L3 166 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 USP46P62068 366 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 ASIC1P78348 528 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 MRPS21P82921 87 aaKnown RBP22.27■■□□□ 1.16
HERC2-204ENST00000563945 IFRD2Q12894 506 aaPredicted RBP22.27■■□□□ 1.16
HERC2-204ENST00000563945 PSAPL1Q6NUJ1 521 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 CYP2U1Q7Z449 544 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 DDX42Q86XP3 938 aaKnown RBP eCLIP22.27■■□□□ 1.16
HERC2-204ENST00000563945 KIAA1958Q8N8K9 716 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 C8orf48Q96LL4 319 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 PNKPQ96T60 521 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 TTLL2Q9BWV7 592 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 CUEDC2Q9H467 287 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 SMPD4Q9NXE4 827 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 MMP17Q9ULZ9 603 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 MORC2Q9Y6X9 1032 aaPredicted RBP22.27■■□□□ 1.16
HERC2-204ENST00000563945 PTPRJQ12913 1337 aa22.27■■□□□ 1.16
HERC2-204ENST00000563945 A0A087X0B3 334 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 K7EQS6 105 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 EIF3DO15371 548 aaKnown RBP eCLIP22.26■■□□□ 1.15
HERC2-204ENST00000563945 MAP3K13O43283 966 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 APODP05090 189 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 MBL2P11226 248 aaPredicted RBP22.26■■□□□ 1.15
HERC2-204ENST00000563945 PTPN1P18031 435 aaKnown RBP22.26■■□□□ 1.15
HERC2-204ENST00000563945 OPRD1P41143 372 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 DHPSP49366 369 aaPredicted RBP22.26■■□□□ 1.15
HERC2-204ENST00000563945 NOP14P78316 857 aaKnown RBP22.26■■□□□ 1.15
HERC2-204ENST00000563945 SLC7A9P82251 487 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 SNRNP35Q16560 246 aaKnown RBP22.26■■□□□ 1.15
HERC2-204ENST00000563945 WDR72Q3MJ13 1102 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 ADGRG2Q8IZP9 1017 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 HPS3Q969F9 1004 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 CCDC127Q96BQ5 260 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 CNOT6LQ96LI5 555 aaKnown RBP22.26■■□□□ 1.15
HERC2-204ENST00000563945 ELOVL4Q9GZR5 314 aa22.26■■□□□ 1.15
HERC2-204ENST00000563945 ANAPC1Q9H1A4 1944 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 EML5Q05BV3 1969 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 A8MXQ7 604 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 PHACTR2O75167 634 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 TACC1O75410 805 aa22.25■■□□□ 1.15
HERC2-204ENST00000563945 ADH1CP00326 375 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms