RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 NASPP49321 788 aaPredicted RBP17.11■□□□□ 0.33
RNF40-205ENST00000563909 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
RNF40-205ENST00000563909 GAB4Q2WGN9 574 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 HSF5Q4G112 596 aaPredicted RBP17.11■□□□□ 0.33
RNF40-205ENST00000563909 SLC41A1Q8IVJ1 513 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 TRIML1Q8N9V2 468 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 TMEM206Q9H813 350 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 KMT5AQ9NQR1 393 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 ARHGAP28Q9P2N2 729 aa17.11■□□□□ 0.33
RNF40-205ENST00000563909 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
RNF40-205ENST00000563909 MORC2Q9Y6X9 1032 aaPredicted RBP17.11■□□□□ 0.33
RNF40-205ENST00000563909 PLXND1Q9Y4D7 1925 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 TTC26A0AVF1 554 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 MYMKA6NI61 221 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 CSH1P0DML2 217 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 CSH2P0DML3 217 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 CHRM1P11229 460 aaPredicted RBP17.1■□□□□ 0.33
RNF40-205ENST00000563909 CCT6AP40227 531 aaKnown RBP17.1■□□□□ 0.33
RNF40-205ENST00000563909 SLC6A11P48066 632 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 GPR15P49685 360 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 MESP2Q0VG99 397 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 SLC39A14Q15043 492 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 STK38Q15208 465 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 ECM1Q16610 540 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 FOXD4L6Q3SYB3 417 aaPredicted RBP17.1■□□□□ 0.33
RNF40-205ENST00000563909 ZC2HC1CQ53FD0 456 aaPredicted RBP17.1■□□□□ 0.33
RNF40-205ENST00000563909 SDHAF4Q5VUM1 108 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 FOXD4L3Q6VB84 417 aaPredicted RBP17.1■□□□□ 0.33
RNF40-205ENST00000563909 RGL4Q8IZJ4 473 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 THEM5Q8N1Q8 247 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 HSPA12BQ96MM6 686 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 PNKPQ96T60 521 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 PRORYQ9H606 182 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 TFIP11Q9UBB9 837 aaKnown RBP17.1■□□□□ 0.33
RNF40-205ENST00000563909 ATMQ13315 3056 aa17.1■□□□□ 0.33
RNF40-205ENST00000563909 CEP192Q8TEP8 1941 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 PIEZO2Q9H5I5 2752 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 FAM149AA5PLN7 773 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 LACTBL1A8MY62 500 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 CLDN3O15551 220 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 XPOTO43592 962 aaKnown RBP17.09■□□□□ 0.33
RNF40-205ENST00000563909 TADA3O75528 432 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 KAT7O95251 611 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 YEATS4O95619 227 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 CLTAP09496 248 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 ATXN1LP0C7T5 689 aaKnown RBP17.09■□□□□ 0.33
RNF40-205ENST00000563909 SMARCB1Q12824 385 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 CAMK2BQ13554 666 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 METTL23Q86XA0 190 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 PDCD7Q8N8D1 485 aaKnown RBP17.09■□□□□ 0.33
RNF40-205ENST00000563909 ARL14EPQ8N8R7 260 aaPredicted RBP17.09■□□□□ 0.33
RNF40-205ENST00000563909 IGSF22Q8N9C0 903 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 LRRC15Q8TF66 581 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 FAM124BQ9H5Z6 455 aaPredicted RBP17.09■□□□□ 0.33
RNF40-205ENST00000563909 PRDM16Q9HAZ2 1276 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 TOR4AQ9NXH8 423 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 CHMP5Q9NZZ3 219 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 LRWD1Q9UFC0 647 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 DSEQ9UL01 958 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 KIAA1024Q9UPX6 916 aa17.09■□□□□ 0.33
RNF40-205ENST00000563909 OBSL1O75147 1896 aa17.08■□□□□ 0.33
RNF40-205ENST00000563909 VWA3AA6NCI4 1184 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 CAPN9O14815 690 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 SLC16A4O15374 487 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 PRPF40AO75400 957 aaKnown RBP17.08■□□□□ 0.32
RNF40-205ENST00000563909 CYP11A1P05108 521 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 MATR3P43243 847 aaKnown RBP eCLIP17.08■□□□□ 0.32
RNF40-205ENST00000563909 KIR2DL1P43626 348 aaPredicted RBP17.08■□□□□ 0.32
RNF40-205ENST00000563909 KRT85P78386 507 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 DNM1Q05193 864 aaKnown RBP17.08■□□□□ 0.32
RNF40-205ENST00000563909 PPP2R3AQ06190 1150 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 GRIK2Q13002 908 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 STRN3Q13033 797 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 IL17AQ16552 155 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 GALNT15Q8N3T1 639 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 LINC00301Q8NCQ3 95 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 SPATA18Q8TC71 538 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 DRC1Q96MC2 740 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 PI4K2AQ9BTU6 479 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 DDX19AQ9NUU7 478 aaKnown RBP17.08■□□□□ 0.32
RNF40-205ENST00000563909 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 UXTQ9UBK9 157 aaPredicted RBP17.08■□□□□ 0.32
RNF40-205ENST00000563909 SUSD2Q9UGT4 822 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 PCDHB5Q9Y5E4 795 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 SPTA1P02549 2419 aa17.08■□□□□ 0.32
RNF40-205ENST00000563909 MGAQ8IWI9 3026 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 IGHV1OR15-9A0A0B4J2B8 117 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 C2orf78A6NCI8 922 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 SPTLC2O15270 562 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 ARHGAP6O43182 974 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 HIP1RO75146 1068 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 PPP6R2O75170 966 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 APODP05090 189 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 CYP17A1P05093 508 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 GNSP15586 552 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 GABRG2P18507 467 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 PAX3P23760 479 aa17.07■□□□□ 0.32
RNF40-205ENST00000563909 LONP1P36776 959 aaKnown RBP17.07■□□□□ 0.32
RNF40-205ENST00000563909 TNFSF9P41273 254 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms