RNA–Protein interactions for RNA: ENST00000563640.1

CBFA2T3-204, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-204ENST00000563640 PDXKO00764 312 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 STAU1O95793 577 aaKnown RBP16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 NR3C1P04150 777 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 DDX6P26196 483 aaKnown RBP eCLIP16.69■□□□□ 0.263e-6■■■□□ 14.7
CBFA2T3-204ENST00000563640 CDH8P55286 799 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 ZXDBP98169 803 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 USP4Q13107 963 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 ZNF77Q15935 545 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 ITPRIPL2Q3MIP1 535 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 SCARA5Q6ZMJ2 495 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 MAMSTRQ6ZN01 415 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 C4orf50Q6ZRC1 276 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 SLC9A9Q8IVB4 645 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 OR6B3Q8NGW1 331 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 MSANTD3Q96H12 275 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 SPATA17Q96L03 361 aa16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 NXF1Q9UBU9 619 aaKnown RBP16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 R3HCC1Q9Y3T6 440 aaKnown RBP16.69■□□□□ 0.26
CBFA2T3-204ENST00000563640 K7ESF4 209 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 C4BPAP04003 597 aaKnown RBP16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 GNL1P36915 607 aaPredicted RBP16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 TNNC1P63316 161 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 ZNF268Q14587 947 aaPredicted RBP16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 ZNF658Q5TYW1 1059 aaPredicted RBP16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 FSTL4Q6MZW2 842 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 VSTM1Q6UX27 236 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 ARL14EPQ8N8R7 260 aaPredicted RBP16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 TTLL2Q9BWV7 592 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 B3GNT5Q9BYG0 378 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 SNX25Q9H3E2 840 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 FBRSL1Q9HCM7 1045 aaKnown RBP16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 UXTQ9UBK9 157 aaPredicted RBP16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 HMGXB4Q9UGU5 601 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 ZMYM5Q9UJ78 669 aa16.68■□□□□ 0.26
CBFA2T3-204ENST00000563640 GOLGA6L22H0YM25 854 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 CALUO43852 315 aaPredicted RBP16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 CKMP06732 381 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 PTPN1P18031 435 aaKnown RBP16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 GRIK1P39086 918 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 BIRC3Q13489 604 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 TRPC3Q13507 836 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 RUNX3Q13761 415 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 NCOA4Q13772 614 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 MTF1Q14872 753 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 ZNF699Q32M78 642 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 KIAA2013Q8IYS2 634 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 B3GALNT2Q8NCR0 500 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 TTC16Q8NEE8 873 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 ERCC4Q92889 916 aaPredicted RBP16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 EPC1Q9H2F5 836 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 VRTNQ9H8Y1 702 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 KIF9Q9HAQ2 790 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 POLR3BQ9NW08 1133 aaPredicted RBP16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 SMG5Q9UPR3 1016 aaKnown RBP16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 MAPK8IP1Q9UQF2 711 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 WNT6Q9Y6F9 365 aa16.67■□□□□ 0.26
CBFA2T3-204ENST00000563640 TRAV19A0A0A6YYK7 116 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 SOBPA7XYQ1 873 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 ATICP31939 592 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 CCR3P51677 355 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 SRSF5Q13243 272 aaKnown RBP16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 ORC1Q13415 861 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 LRRC32Q14392 662 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 MAPRE1Q15691 268 aaKnown RBP16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 ZACNQ401N2 412 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 SPOPLQ6IQ16 392 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 DENND5BQ6ZUT9 1274 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 PAQR9Q6ZVX9 377 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 SPEM1Q8N4L4 309 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 ATRIPQ8WXE1 791 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 RUBCNQ92622 972 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 EZH1Q92800 747 aaPredicted RBP16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 IER2Q9BTL4 223 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.268e-7■■■■■ 117.5
CBFA2T3-204ENST00000563640 LMBRD1Q9NUN5 540 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 THG1LQ9NWX6 298 aaKnown RBP16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 TRAF3IP3Q9Y228 551 aa16.66■□□□□ 0.26
CBFA2T3-204ENST00000563640 MYO18AQ92614 2054 aaKnown RBP16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 A8MXQ7 604 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 SCAMP3O14828 347 aaKnown RBP16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 PHACTR2O75167 634 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 CXCL12P48061 93 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 NOP14P78316 857 aaKnown RBP16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 LPAL2Q16609 132 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 EML3Q32P44 896 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 COBLL1Q53SF7 1204 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 TMEM196Q5HYL7 178 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 CEP135Q66GS9 1140 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 C1orf228Q6PIY5 440 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 SMYD4Q8IYR2 804 aaPredicted RBP16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 SH3RF2Q8TEC5 729 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 C8orf48Q96LL4 319 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 HINFPQ9BQA5 517 aa16.65■□□□□ 0.26
CBFA2T3-204ENST00000563640 ZNF840PA6NDX5 716 aa16.64■□□□□ 0.25
CBFA2T3-204ENST00000563640 ANTXRLA6NF34 631 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms