RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 BTBD3Q9Y2F9 522 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 FER1L4A9Z1Z3 1794 aa4.15□□□□□ -1.74
HMGB1P33-201ENST00000563485 EXOC3O60645 756 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 TUBB4AP04350 444 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 XRCC6P12956 609 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 SFPQP23246 707 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 FPR3P25089 353 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 PRKAG1P54619 331 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 E2F1Q01094 437 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 TBC1D25Q3MII6 688 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 PLA1AQ53H76 456 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 L1TD1Q5T7N2 865 aaKnown RBP4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 MORN5Q5VZ52 161 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 SLC9A4Q6AI14 798 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 C11orf87Q6NUJ2 197 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 SLC2A7Q6PXP3 512 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 CATSPERGQ6ZRH7 1159 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 OVCH2Q7RTZ1 564 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 CAND1Q86VP6 1230 aaKnown RBP4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 IZUMO1Q8IYV9 350 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 MPP5Q8N3R9 675 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 OR6B3Q8NGW1 331 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 RAPGEF4Q8WZA2 1011 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 RPL36ALQ969Q0 106 aaKnown RBP4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 C5orf34Q96MH7 638 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 ASB2Q96Q27 587 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 DPCDQ9BVM2 203 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 B3GNT5Q9BYG0 378 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 DPH1Q9BZG8 443 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 MS4A7Q9GZW8 240 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 SMURF2Q9HAU4 748 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 ATP6V0A4Q9HBG4 840 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 TRMT13Q9NUP7 481 aaKnown RBP4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 TBC1D30Q9Y2I9 924 aa4.15□□□□□ -1.75
HMGB1P33-201ENST00000563485 PHGDHO43175 533 aaKnown RBP4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 RFPL1O75677 317 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 DLDP09622 509 aaKnown RBP4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 AGFG1P52594 562 aaKnown RBP4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 IGBP1P78318 339 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 SLC13A2Q13183 592 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 GTF2H3Q13889 308 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 PTCHD3Q3KNS1 767 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 ANO6Q4KMQ2 910 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 SWSAP1Q6NVH7 229 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 NPNTQ6UXI9 565 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 RAVER1Q8IY67 606 aaKnown RBP4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 FAM177A1Q8N128 213 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 TERB1Q8NA31 727 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 C8orf58Q8NAV2 365 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 BPIFB1Q8TDL5 484 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 MAML1Q92585 1016 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 CAMKK2Q96RR4 588 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 PRR25Q96S07 402 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 BHMT2Q9H2M3 363 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 PDGFCQ9NRA1 345 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 ZIM2Q9NZV7 527 aa4.14□□□□□ -1.75
HMGB1P33-201ENST00000563485 SMIM35A0A1B0GVV1 85 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 H7C1Q1 480 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 AP4M1O00189 453 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 TUSC2O75896 110 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 PRKCBP05771 671 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 EN2P19622 333 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 ARHGAP25P42331 645 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 RENBPP51606 427 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 ALDH5A1P51649 535 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 EPHB1P54762 984 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 RNASE12Q5GAN4 147 aaKnown RBP4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 DCAF12L1Q5VU92 463 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 ZNF366Q8N895 744 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 IL31RAQ8NI17 732 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 PPP2R3CQ969Q6 453 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 SNX18Q96RF0 628 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 C17orf80Q9BSJ5 609 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 CIPCQ9C0C6 399 aa4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 GBA2Q9HCG7 927 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P33-201ENST00000563485 KCNU1A8MYU2 1149 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 POC1B-GALNT4F8VUJ3 575 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 TBX3O15119 743 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 TBC1D4O60343 1298 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 SLC7A1P30825 629 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 PTGER1P34995 402 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 PSG6Q00889 435 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 RAB32Q13637 225 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 MLC1Q15049 377 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 MTHFD1LQ6UB35 978 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 ZDHHC24Q6UX98 284 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 SERPINA13PQ6UXR4 307 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 MAEAQ7L5Y9 396 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 CNGA4Q8IV77 575 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 GALNT16Q8N428 558 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 GALNT4Q8N4A0 578 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 OR56A3Q8NH54 315 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 DENND1AQ8TEH3 1009 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 RUNDC1Q96C34 613 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 ZNF48Q96MX3 618 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 PRSS22Q9GZN4 317 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 SPRTNQ9H040 489 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 ZSCAN32Q9NX65 697 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 KLHL13Q9P2N7 655 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms