RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 NLRP10Q86W26 655 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 RPAP2Q8IXW5 612 aaPredicted RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 C17orf53Q8N3J3 647 aaPredicted RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SPC24Q8NBT2 197 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 GDAP1Q8TB36 358 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 NMD3Q96D46 503 aaKnown RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 CEP95Q96GE4 821 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 MIPEPQ99797 713 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 DBNDD2Q9BQY9 259 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SLC12A9Q9BXP2 914 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 ABHD16BQ9H3Z7 469 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SYNCQ9H7C4 482 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 BRF2Q9HAW0 419 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SERHLQ9NQF3 203 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 NECTIN3Q9NQS3 549 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 HPF1Q9NWY4 346 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 TMOD3Q9NYL9 352 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 C5AR2Q9P296 337 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 TBX20Q9UMR3 447 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 COG5Q9UP83 839 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 CAMK2AQ9UQM7 478 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 USP15Q9Y4E8 981 aaPredicted RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 HS3ST4Q9Y661 456 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 ATRNO75882 1429 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 ALS2Q96Q42 1657 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 COL5A2P05997 1499 aaPredicted RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 A0A087WZ62 844 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 ARHGAP10A1A4S6 786 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 HMX2A2RU54 273 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 CCDC69A6NI79 296 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 VILLO15195 856 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SLC22A3O75751 556 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 PRPF6O94906 941 aaKnown RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 C6P13671 934 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 PAMP19021 973 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 CASQ1P31415 396 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 IL13P35225 146 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 YBEYP58557 167 aaPredicted RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SOX4Q06945 474 aaPredicted RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 DDR1Q08345 913 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 IFT88Q13099 833 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SNAPC2Q13487 334 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 MAMLD1Q13495 774 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 ADIPOQQ15848 244 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 ZNF530Q6P9A1 599 aaPredicted RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 PAOXQ6QHF9 649 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 EP400NLQ6ZTU2 488 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 GPR149Q86SP6 731 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 ARMC8Q8IUR7 673 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 PHYKPLQ8IUZ5 450 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 UNC45BQ8IWX7 931 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 RHOT1Q8IXI2 618 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 DIS3L2Q8IYB7 885 aaKnown RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 TAGAPQ8N103 731 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 GALNT4Q8N4A0 578 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 MFSD2AQ8NA29 543 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 ZNF540Q8NDQ6 660 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 IPMKQ8NFU5 416 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 KRT35Q92764 455 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SYTL4Q96C24 671 aaPredicted RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SUCLG2Q96I99 432 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 FEM1CQ96JP0 617 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 CLPTM1LQ96KA5 538 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 REEP2Q9BRK0 252 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 FDXACB1Q9BRP7 624 aaPredicted RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 HGH1Q9BTY7 390 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 FTOQ9C0B1 505 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 RC3H2Q9HBD1 1191 aaKnown RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SSU72Q9NP77 194 aaKnown RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 PRDM8Q9NQV8 689 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 KCNH7Q9NS40 1196 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 PRSS50Q9UI38 385 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SCOCQ9UIL1 159 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 SMG5Q9UPR3 1016 aaKnown RBP5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 NUMBLQ9Y6R0 609 aa5.64□□□□□ -1.51
VPS35P1-201ENST00000563400 IGSF1Q8N6C5 1336 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 BCL9LQ86UU0 1499 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 TRPM3Q9HCF6 1732 aaPredicted RBP5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 FAM95CA0A1B0GW59 222 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 SHISA3A0PJX4 238 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 WTIPA6NIX2 430 aaPredicted RBP5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 CAPN9O14815 690 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 PLSCR1O15162 318 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 MYO1BO43795 1136 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 CLASP2O75122 1294 aaKnown RBP5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 KRT38O76015 456 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 LRIG2O94898 1065 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 TIAF1O95411 115 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 ANXA1P04083 346 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 PRKCBP05771 671 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 IFNAR1P17181 557 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 ARL3P36405 182 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 CSE1LP55060 971 aaKnown RBP5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 AP2B1P63010 937 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 HMGN5P82970 282 aaKnown RBP5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 BFSP1Q12934 665 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 SPIDRQ14159 915 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 ODF2Q5BJF6 829 aa5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 HABP4Q5JVS0 413 aaKnown RBP5.63□□□□□ -1.51
VPS35P1-201ENST00000563400 RCSD1Q6JBY9 416 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms