RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 TRPM5Q9NZQ8 1165 aa13□□□□□ -0.33
NSMCE1-204ENST00000563273 ARHGAP26Q9UNA1 814 aa13□□□□□ -0.33
NSMCE1-204ENST00000563273 TCHHQ07283 1943 aa13□□□□□ -0.33
NSMCE1-204ENST00000563273 COL4A2P08572 1712 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 SPECC1L-ADORA2AF8WAN1 911 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 LAMTOR5O43504 91 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 GFRA3O60609 400 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 RTN3O95197 1032 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 OLFM2O95897 454 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 SP9P0CG40 484 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 TRIM49P0CI25 452 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 TRIM49CP0CI26 452 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 CHRNB1P11230 501 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 GCLMP48507 274 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 KPNA1P52294 538 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 USP4Q13107 963 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 LRRC32Q14392 662 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 PDGFRLQ15198 375 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 ZNF77Q15935 545 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 ITPRIPL2Q3MIP1 535 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 FAM35AQ86V20 835 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 SMYD4Q8IYR2 804 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 NUP93Q8N1F7 819 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 CCDC150Q8NCX0 1101 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 PDZD8Q8NEN9 1154 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 TAS1R2Q8TE23 839 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 DHTKD1Q96HY7 919 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 SLITRK1Q96PX8 696 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 FAM126AQ9BYI3 521 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 DNAI2Q9GZS0 605 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 NIF3L1Q9GZT8 377 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 CSNK1G1Q9HCP0 422 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 DMAP1Q9NPF5 467 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 PRMT8Q9NR22 394 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 SPATA6Q9NWH7 488 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 CCL26Q9Y258 94 aa12.99□□□□□ -0.33
NSMCE1-204ENST00000563273 FAM92AA1XBS5 289 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 ZNF840PA6NDX5 716 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 PRR23AA6NEV1 266 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 PSMA7O14818 248 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 CKMP06732 381 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 CCNE1P24864 410 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 RAP1GAPP47736 663 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 NDST1P52848 882 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 CACNA2D1P54289 1103 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 USP46P62068 366 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 SLC7A9P82251 487 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 AMPD2Q01433 879 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 STIM1Q13586 685 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 RUNX3Q13761 415 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 MTF1Q14872 753 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 DGKKQ5KSL6 1271 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 SNX30Q5VWJ9 437 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 CC2D1AQ6P1N0 951 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 SCARA5Q6ZMJ2 495 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 PAQR9Q6ZVX9 377 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 FRMD5Q7Z6J6 570 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 FUKQ8N0W3 1084 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 SYNPOQ8N3V7 929 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 FBXL13Q8NEE6 735 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 NELL1Q92832 810 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 NKD2Q969F2 451 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 ZFYVE19Q96K21 471 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 SMG9Q9H0W8 520 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 APOBEC3GQ9HC16 384 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 PNPLA8Q9NP80 782 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 GKN1Q9NS71 199 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 TMEM30AQ9NV96 361 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 GTSE1Q9NYZ3 720 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 NDRG2Q9UN36 371 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 COQ4Q9Y3A0 265 aa12.98□□□□□ -0.33
NSMCE1-204ENST00000563273 VPS13AQ96RL7 3174 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 C2orf78A6NCI8 922 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 CLDN5O00501 218 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 TNFRSF10BO14763 440 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 CILPO75339 1184 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 CLSTN1O94985 981 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 PAPSS2O95340 614 aaPredicted RBP12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 OAS1P00973 400 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 HDCP19113 662 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 YWHAQP27348 245 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 MXI1P50539 228 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 TUBP50607 506 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 PPP2R5DQ14738 602 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 ANKRD40Q6AI12 368 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 SPOPLQ6IQ16 392 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 ACOT1Q86TX2 421 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 GPIHBP1Q8IV16 184 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 ARL14EPQ8N8R7 260 aaPredicted RBP12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 OSCP1Q8WVF1 389 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 EXOC4Q96A65 974 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 CEP63Q96MT8 703 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 SLC22A12Q96S37 553 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 HNRNPABQ99729 332 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 DUSP9Q99956 384 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 NT5C1AQ9BXI3 368 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 LMAN1LQ9HAT1 526 aa12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 METTL14Q9HCE5 456 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-204ENST00000563273 TRPC7Q9HCX4 862 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms