RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 CCDC192P0DO97 292 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 TRIM21P19474 475 aaKnown RBP17.62■□□□□ 0.41
CDT1-202ENST00000562747 BDNFP23560 247 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 FMO5P49326 533 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 CYP27A1Q02318 531 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 INCA1Q0VD86 236 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 GRM2Q14416 872 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 RBM43Q6ZSC3 357 aaKnown RBP17.62■□□□□ 0.41
CDT1-202ENST00000562747 TRIM59Q8IWR1 403 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 ZNF687Q8N1G0 1237 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 GPR88Q9GZN0 384 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 FAM124BQ9H5Z6 455 aaPredicted RBP17.62■□□□□ 0.41
CDT1-202ENST00000562747 ZNF334Q9HCZ1 680 aaPredicted RBP17.62■□□□□ 0.41
CDT1-202ENST00000562747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDT1-202ENST00000562747 PRMT8Q9NR22 394 aaPredicted RBP17.62■□□□□ 0.41
CDT1-202ENST00000562747 NCDNQ9UBB6 729 aa17.62■□□□□ 0.41
CDT1-202ENST00000562747 SMG5Q9UPR3 1016 aaKnown RBP17.62■□□□□ 0.41
CDT1-202ENST00000562747 PTPRDP23468 1912 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 A0A1W2PRU2 124 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 P4HA2O15460 535 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 ERCC5P28715 1186 aaPredicted RBP17.61■□□□□ 0.41
CDT1-202ENST00000562747 CDC25CP30307 473 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 MAGEA9P43362 315 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 RPS9P46781 194 aaKnown RBP17.61■□□□□ 0.41
CDT1-202ENST00000562747 GPR15P49685 360 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 NDST1P52848 882 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 DDR2Q16832 855 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 DPCR1Q3MIW9 517 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 CT47A1Q5JQC4 288 aaPredicted RBP17.61■□□□□ 0.41
CDT1-202ENST00000562747 SCN4BQ8IWT1 228 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 CRYBG2Q8N1P7 616 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 TTC39CQ8N584 583 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 SHKBP1Q8TBC3 707 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 MED15Q96RN5 788 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 ELOVL4Q9GZR5 314 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 EPC1Q9H2F5 836 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 ZSCAN32Q9NX65 697 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 NCANO14594 1321 aa17.61■□□□□ 0.41
CDT1-202ENST00000562747 TRIM66O15016 1216 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 NOL4O94818 638 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 TDGF1P13385 188 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 HMGA1P17096 107 aaKnown RBP17.6■□□□□ 0.41
CDT1-202ENST00000562747 GJA1P17302 382 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 GABRR2P28476 465 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 GRIK1P39086 918 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 CETN1Q12798 172 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 MTAPQ13126 283 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 TEAD2Q15562 447 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 FAM78AQ5JUQ0 283 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 GAREM2Q75VX8 874 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 ATRIPQ8WXE1 791 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 ELSPBP1Q96BH3 223 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 TRMT2BQ96GJ1 504 aaKnown RBP17.6■□□□□ 0.41
CDT1-202ENST00000562747 SPATA17Q96L03 361 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 MYRFLQ96LU7 910 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 GCNAQ96QF7 691 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 DNAI2Q9GZS0 605 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 ATXN3LQ9H3M9 355 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 IL21Q9HBE4 155 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 UXTQ9UBK9 157 aaPredicted RBP17.6■□□□□ 0.41
CDT1-202ENST00000562747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDT1-202ENST00000562747 ATP8B3O60423 1300 aa17.6■□□□□ 0.41
CDT1-202ENST00000562747 SLC38A8A6NNN8 435 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 CILPO75339 1184 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 ANXA13P27216 316 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 KCNH2Q12809 1159 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 TPD52L1Q16890 204 aaPredicted RBP17.59■□□□□ 0.41
CDT1-202ENST00000562747 ARHGAP15Q53QZ3 475 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 SDHAF4Q5VUM1 108 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 ZNF852Q6ZMS4 543 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 ACOT1Q86TX2 421 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 DNASE1L2Q92874 299 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 CNOT6LQ96LI5 555 aaKnown RBP17.59■□□□□ 0.41
CDT1-202ENST00000562747 C8orf48Q96LL4 319 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 ZSWIM3Q96MP5 696 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 ASB16Q96NS5 453 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 NT5C1AQ9BXI3 368 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 B3GNT5Q9BYG0 378 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 ZNF518BQ9C0D4 1074 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 HMGXB4Q9UGU5 601 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 ZMYM5Q9UJ78 669 aa17.59■□□□□ 0.41
CDT1-202ENST00000562747 NDRG2Q9UN36 371 aaKnown RBP17.59■□□□□ 0.41
CDT1-202ENST00000562747 AFPP02771 609 aaKnown RBP17.58■□□□□ 0.4
CDT1-202ENST00000562747 TGM1P22735 817 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 CCDC183Q5T5S1 534 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 VITQ6UXI7 678 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 SMARCD2Q92925 531 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 TATDN2Q93075 761 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 THAP9Q9H5L6 903 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 SLITRK6Q9H5Y7 841 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 TRPV4Q9HBA0 871 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 ZFP14Q9HCL3 533 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 PARD6AQ9NPB6 346 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 EHD2Q9NZN4 543 aa17.58■□□□□ 0.4
CDT1-202ENST00000562747 MAGED2Q9UNF1 606 aaPredicted RBP17.58■□□□□ 0.4
CDT1-202ENST00000562747 SOBPA7XYQ1 873 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 F8VP50 259 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 CLDN5O00501 218 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 F11P03951 625 aa17.57■□□□□ 0.4
CDT1-202ENST00000562747 CD58P19256 250 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms