RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 VN1R3Q9BXE9 311 aa14.68□□□□□ -0.06
CLK3-209ENST00000562670 TLR10Q9BXR5 811 aa14.68□□□□□ -0.06
CLK3-209ENST00000562670 ZMYND8Q9ULU4 1186 aaPredicted RBP14.68□□□□□ -0.06
CLK3-209ENST00000562670 RWDD3Q9Y3V2 267 aa14.68□□□□□ -0.06
CLK3-209ENST00000562670 NT5C1B-RDH14C9J2C7 533 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 MYO1FO00160 1098 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 TULP2O00295 520 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 CLDN5O00501 218 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 SART1O43290 800 aaKnown RBP14.67□□□□□ -0.06
CLK3-209ENST00000562670 PROSCO94903 275 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 FBXO21O94952 628 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 GLI1P08151 1106 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 TCP1P17987 556 aaKnown RBP14.67□□□□□ -0.06
CLK3-209ENST00000562670 CREMQ03060 361 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 GPR17Q13304 367 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 C2CD6Q53TS8 623 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 SPOUT1Q5T280 376 aaKnown RBP14.67□□□□□ -0.06
CLK3-209ENST00000562670 CYP4A22Q5TCH4 519 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 FAM117BQ6P1L5 589 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 FAM183BPQ6ZVS7 135 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 SLC26A9Q7LBE3 791 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 PEX26Q7Z412 305 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 TMCO2Q7Z6W1 182 aaPredicted RBP14.67□□□□□ -0.06
CLK3-209ENST00000562670 PIGZQ86VD9 579 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 LRRTM3Q86VH5 581 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 SPATA2LQ8IUW3 424 aaPredicted RBP14.67□□□□□ -0.06
CLK3-209ENST00000562670 ZMIZ2Q8NF64 920 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 SPPL2BQ8TCT7 592 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 ZNF592Q92610 1267 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 HES6Q96HZ4 224 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 TMEM209Q96SK2 561 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 SMOQ99835 787 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 SELENOOQ9BVL4 669 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 ST7Q9NRC1 585 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 TMLHEQ9NVH6 421 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 ASNSD1Q9NWL6 643 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 HSFX1Q9UBD0 423 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 TJP2Q9UDY2 1190 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 IP6K2Q9UHH9 426 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 SNX12Q9UMY4 172 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 HYOU1Q9Y4L1 999 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 PCDHB12Q9Y5F1 795 aa14.67□□□□□ -0.06
CLK3-209ENST00000562670 HHLA1C9JL84 531 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 DPYSL4O14531 572 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 PAPSS1O43252 624 aaPredicted RBP14.66□□□□□ -0.06
CLK3-209ENST00000562670 GABBR2O75899 941 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 ATP1A1P05023 1023 aaKnown RBP14.66□□□□□ -0.06
CLK3-209ENST00000562670 KRT3P12035 628 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 GLUD2P49448 558 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 SLC6A3Q01959 620 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 PIGHQ14442 188 aaPredicted RBP14.66□□□□□ -0.06
CLK3-209ENST00000562670 ACAP1Q15027 740 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 PSMD5Q16401 504 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 SLC39A12Q504Y0 691 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 DCUN1D2Q6PH85 259 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.66□□□□□ -0.06
CLK3-209ENST00000562670 DPF3Q92784 378 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 CD101Q93033 1021 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 MCEEQ96PE7 176 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 ZBED2Q9BTP6 218 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 PLVAPQ9BX97 442 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 CNGB3Q9NQW8 809 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLK3-209ENST00000562670 TMEM59LQ9UK28 342 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 AMFRQ9UKV5 643 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 LZTS1Q9Y250 596 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 PCDHB5Q9Y5E4 795 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 MRFAP1Q9Y605 127 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 ALG6Q9Y672 507 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 SAR1BQ9Y6B6 198 aa14.66□□□□□ -0.06
CLK3-209ENST00000562670 MYH10P35580 1976 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 TRIM66O15016 1216 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 TLL1O43897 1013 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 BEST1O76090 585 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 FTCDO95954 541 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 CTNNA2P26232 953 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 RGS7P49802 495 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 MAP3K7CLP57077 242 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 ADCY1Q08828 1119 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 FAM102AQ5T9C2 384 aaPredicted RBP14.65□□□□□ -0.06
CLK3-209ENST00000562670 LLGL2Q6P1M3 1020 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 CEP57Q86XR8 500 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 IRGQQ8WZA9 623 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 C8orf48Q96LL4 319 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 NCAPGQ9BPX3 1015 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 LRRC4Q9HBW1 653 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 METTL5Q9NRN9 209 aaKnown RBP14.65□□□□□ -0.06
CLK3-209ENST00000562670 TMEM30AQ9NV96 361 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 CHORDC1Q9UHD1 332 aaPredicted RBP14.65□□□□□ -0.06
CLK3-209ENST00000562670 CDC23Q9UJX2 597 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 MAFFQ9ULX9 164 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 SSX2IPQ9Y2D8 614 aa14.65□□□□□ -0.06
CLK3-209ENST00000562670 CCDC66A2RUB6 948 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 MTMR11A4FU01 709 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 C2CD4BA6NLJ0 364 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 C5orf67F2Z3F1 127 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 ENC1O14682 589 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 HSF2BPO75031 334 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 URODP06132 367 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 COMTP21964 271 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms