RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 CSDE1O75534 798 aaKnown RBP12.23□□□□□ -0.45
PCAT1-202ENST00000561978 KCNJ1P48048 391 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 PPIGQ13427 754 aaKnown RBP eCLIP12.23□□□□□ -0.45
PCAT1-202ENST00000561978 PTK6Q13882 451 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 WDR72Q3MJ13 1102 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 ZNF394Q53GI3 561 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 ZNF365Q70YC5 407 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 NME8Q8N427 588 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 SH2D3CQ8N5H7 860 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 NIPA2Q8N8Q9 360 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 C3orf20Q8ND61 904 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 C1orf54Q8WWF1 131 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 NLRP7Q8WX94 980 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 SCLT1Q96NL6 688 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 PDZD7Q9H5P4 517 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 IL23AQ9NPF7 189 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 USTQ9Y2C2 406 aa12.23□□□□□ -0.45
PCAT1-202ENST00000561978 CAND2O75155 1236 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 GPR32O75388 356 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 TJP3O95049 919 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 RALAP11233 206 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 SSTR3P32745 418 aaPredicted RBP12.22□□□□□ -0.45
PCAT1-202ENST00000561978 KRT17Q04695 432 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 KLF1Q13351 362 aaPredicted RBP12.22□□□□□ -0.45
PCAT1-202ENST00000561978 TCTN1Q2MV58 587 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 KRT71Q3SY84 523 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 DNAJC21Q5F1R6 531 aaKnown RBP12.22□□□□□ -0.45
PCAT1-202ENST00000561978 LLGL2Q6P1M3 1020 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 SCARA5Q6ZMJ2 495 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 CEP128Q6ZU80 1094 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 TRMT10CQ7L0Y3 403 aaKnown RBP12.22□□□□□ -0.45
PCAT1-202ENST00000561978 HS6ST3Q8IZP7 471 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 CCDC89Q8N998 374 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 C1orf127Q8N9H9 656 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 CCHCR1Q8TD31 782 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 SNF8Q96H20 258 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 TSPAN18Q96SJ8 248 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 AGO3Q9H9G7 860 aaKnown RBP12.22□□□□□ -0.45
PCAT1-202ENST00000561978 ASIC3Q9UHC3 531 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 ITGA11Q9UKX5 1188 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 C2CD2Q9Y426 696 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 TRPV2Q9Y5S1 764 aa12.22□□□□□ -0.45
PCAT1-202ENST00000561978 TCRBV5S1A1TA0A578 114 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 STAU1O95793 577 aaKnown RBP12.21□□□□□ -0.45
PCAT1-202ENST00000561978 ITGB3P05106 788 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 CD19P15391 556 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 ARF4P18085 180 aaPredicted RBP12.21□□□□□ -0.45
PCAT1-202ENST00000561978 TAS2R40P59535 323 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 RBP5P82980 135 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 NFX1Q12986 1120 aaKnown RBP12.21□□□□□ -0.45
PCAT1-202ENST00000561978 BYSLQ13895 437 aaKnown RBP12.21□□□□□ -0.45
PCAT1-202ENST00000561978 LPIN1Q14693 890 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 TMEM132DQ14C87 1099 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 PCBP1Q15365 356 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCAT1-202ENST00000561978 SHHQ15465 462 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 FAM26DQ5JW98 314 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 FBXO47Q5MNV8 452 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 TMEM240Q5SV17 173 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 PPP1R15BQ5SWA1 713 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 C6orf118Q5T5N4 469 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 SCARA3Q6AZY7 606 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 JADE1Q6IE81 842 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 CDR2LQ86X02 465 aaPredicted RBP12.21□□□□□ -0.45
PCAT1-202ENST00000561978 WDTC1Q8N5D0 677 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 DBF4BQ8NFT6 615 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 OR2W6PQ8NHA6 318 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 ACAP3Q96P50 834 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 TMEM109Q9BVC6 243 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 STMN4Q9H169 189 aaPredicted RBP12.21□□□□□ -0.45
PCAT1-202ENST00000561978 SIX4Q9UIU6 781 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 KIAA1257Q9ULG3 409 aa12.21□□□□□ -0.45
PCAT1-202ENST00000561978 ANK1P16157 1881 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 A0A1B0GUA9 196 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 SIGLEC16A6NMB1 481 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 NDC80O14777 642 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 NFICP08651 508 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 CD52P31358 61 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 PTPN7P35236 360 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 MDH1P40925 334 aaKnown RBP12.21□□□□□ -0.46
PCAT1-202ENST00000561978 ATP1A2P50993 1020 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 EMP3P54852 163 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 GSCP56915 257 aaPredicted RBP12.21□□□□□ -0.46
PCAT1-202ENST00000561978 RPL7AP62424 266 aaKnown RBP12.21□□□□□ -0.46
PCAT1-202ENST00000561978 ADCY2Q08462 1091 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 MTA1Q13330 715 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 SNX1Q13596 522 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 ZNF268Q14587 947 aaPredicted RBP12.21□□□□□ -0.46
PCAT1-202ENST00000561978 SLC10A6Q3KNW5 377 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 DCAF4L1Q3SXM0 396 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 ZFYVE27Q5T4F4 411 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 BCAS4Q8TDM0 211 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 FNIP1Q8TF40 1166 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 TFAP2BQ92481 460 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 PGM2Q96G03 612 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 TMEM176AQ96HP8 235 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 CCDC114Q96M63 670 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 MCEEQ96PE7 176 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 TRAIPQ9BWF2 469 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 MIS12Q9H081 205 aa12.21□□□□□ -0.46
PCAT1-202ENST00000561978 ADAMTS10Q9H324 1103 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms