RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 BAATQ14032 418 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 EMC2Q15006 297 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 IGDCC3Q8IVU1 814 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 CCDC110Q8TBZ0 833 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 MMADHCQ9H3L0 296 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 FBXO40Q9UH90 709 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 ASB3Q9Y575 518 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 COL11A2P13942 1736 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 EP400Q96L91 3159 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 C3orf70A6NLC5 250 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 KBTBD13C9JR72 458 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 H3BRJ5 948 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 COPEO14579 308 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 SNUPNO95149 360 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 NR3C2P08235 984 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 KRT7P08729 469 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 RARBP10826 455 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 ETV4P43268 484 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 SERPINB4P48594 390 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 NEK3P51956 506 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 CACNA2D1P54289 1103 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 NRLP54845 237 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 MDH1BQ5I0G3 518 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 BBS12Q6ZW61 710 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 CTAGE3PQ8IX95 158 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 KCTD6Q8NC69 237 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 CPSF2Q9P2I0 782 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 ZNF212Q9UDV6 495 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 PCSK1NQ9UHG2 260 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 WASF2Q9Y6W5 498 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 TCRBV9S1A1TA0A576 114 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 I3L4J1 428 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 CD48P09326 243 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 DHRS4L1P0CG22 281 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 KRT3P12035 628 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 AMPD1P23109 780 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 IL1R2P27930 398 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 ZNF132P52740 706 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 PPP1R15BQ5SWA1 713 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 OR52E8Q6IFG1 317 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 SCARA5Q6ZMJ2 495 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 POLNQ7Z5Q5 900 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 JPH1Q9HDC5 661 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 CISHQ9NSE2 258 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 PPARGC1AQ9UBK2 798 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 STRIP2Q9ULQ0 834 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 STYXL1Q9Y6J8 313 aa14.6□□□□□ -0.07
VPS9D1-202ENST00000561976 A8MXQ7 604 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 MCF2LO15068 1137 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 WEE2P0C1S8 567 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 KDELR1P24390 212 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 CHRNA5P30532 468 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 POLE2P56282 527 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 VSIG10LQ86VR7 867 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 WDTC1Q8N5D0 677 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 NIPA2Q8N8Q9 360 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 SLC44A1Q8WWI5 657 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 CFAP36Q96G28 342 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 MAGEA13PA6NCF6 341 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 TBC1D12O60347 775 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 LRCH4O75427 683 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 RBP3P10745 1247 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 DPYSL3Q14195 570 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 C6orf163Q5TEZ5 329 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 CWF19L1Q69YN2 538 aaKnown RBP14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 SMC1BQ8NDV3 1235 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 JOSD2Q8TAC2 188 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 HSPH1Q92598 858 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 GPRASP2Q96D09 838 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 ZNF184Q99676 751 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 CALN1Q9BXU9 219 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 FRMD8P1Q9BZ68 369 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 ANGPTL2Q9UKU9 493 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 SCAF8Q9UPN6 1271 aaKnown RBP14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 EFR3BQ9Y2G0 817 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 CNTNAP2Q9UHC6 1331 aa14.59□□□□□ -0.07
VPS9D1-202ENST00000561976 E5RJQ4 531 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 CIB2O75838 187 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 FAM155BO75949 473 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 KITP10721 976 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 CD19P15391 556 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 MYL6P60660 151 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 ACTR2P61160 394 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 TMPRSS15P98073 1019 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 ROR2Q01974 943 aaKnown RBP14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 SLC25A11Q02978 314 aaKnown RBP14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 SLC18A2Q05940 514 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 KDSRQ06136 332 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 FAM182AQ5T1J6 154 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 MEX3CQ5U5Q3 659 aaKnown RBP14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 RSBN1LQ6PCB5 846 aaPredicted RBP14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 MFN1Q8IWA4 741 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 THNSL1Q8IYQ7 743 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 PPM1NQ8N819 430 aa14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 SRPK1Q96SB4 655 aaKnown RBP14.58□□□□□ -0.07
VPS9D1-202ENST00000561976 TCHPQ9BT92 498 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms