RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 PCDH9Q9HC56 1237 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 TPX2Q9ULW0 747 aaKnown RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 SMIM28A0A1B0GU29 152 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 SGK1O00141 431 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 EBAG9O00559 213 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 NDC80O14777 642 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 XPOTO43592 962 aaKnown RBP10.29□□□□□ -0.76
SMG1-205ENST00000561947 ETS1P14921 441 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 KCNE1P15382 129 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 PDGFRAP16234 1089 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 CRYBB1P53674 252 aaPredicted RBP10.29□□□□□ -0.76
SMG1-205ENST00000561947 OTUD4Q01804 1114 aaKnown RBP10.29□□□□□ -0.76
SMG1-205ENST00000561947 PLCB3Q01970 1234 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 PPARDQ03181 441 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 GPS1Q13098 491 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 TAF5Q15542 800 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 LONRF1Q17RB8 773 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 XKR4Q5GH76 650 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 ARHGAP17Q68EM7 881 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 PMF1Q6P1K2 205 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 RFX6Q8HWS3 928 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 OR6B3Q8NGW1 331 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 ACTL9Q8TC94 416 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 HSPH1Q92598 858 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 ZNF560Q96MR9 790 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 SERPINB12Q96P63 405 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 PEBP4Q96S96 227 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 TMEM121Q9BTD3 319 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 FAM49BQ9NUQ9 324 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 RNF19AQ9NV58 838 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 HESX1Q9UBX0 185 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 E7EVH7 732 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 TULP2O00295 520 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 DPYSL4O14531 572 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 GNAT1P11488 350 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 HOXC8P31273 242 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 PSMC4P43686 418 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 SEC24CP53992 1094 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 MORF4L2Q15014 288 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 FSCN1Q16658 493 aaKnown RBP10.29□□□□□ -0.76
SMG1-205ENST00000561947 FBXO47Q5MNV8 452 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 OLFML1Q6UWY5 402 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 CYP4V2Q6ZWL3 525 aaPredicted RBP10.29□□□□□ -0.76
SMG1-205ENST00000561947 SRLQ86TD4 932 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 TMEM110Q86TL2 294 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 IFNL1Q8IU54 200 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 NME8Q8N427 588 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 MYCBPAPQ8TBZ2 947 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 SLC35F5Q8WV83 523 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 CENPTQ96BT3 561 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 PPANQ9NQ55 473 aaKnown RBP10.29□□□□□ -0.76
SMG1-205ENST00000561947 KLK14Q9P0G3 267 aa10.29□□□□□ -0.76
SMG1-205ENST00000561947 SAE1Q9UBE0 346 aaPredicted RBP10.29□□□□□ -0.76
SMG1-205ENST00000561947 A8MXQ7 604 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 TRAPPC3O43617 180 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 TCEA3O75764 348 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 ENDOD1O94919 500 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 FAM107AO95990 144 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 PNPLA4P41247 253 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 PURAQ00577 322 aaKnown RBP10.28□□□□□ -0.76
SMG1-205ENST00000561947 SLC6A3Q01959 620 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 C15orf59Q2T9L4 293 aaPredicted RBP10.28□□□□□ -0.76
SMG1-205ENST00000561947 SH3PXD2AQ5TCZ1 1133 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 SESTD1Q86VW0 696 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 ZNF473Q8WTR7 871 aaKnown RBP10.28□□□□□ -0.76
SMG1-205ENST00000561947 STK32AQ8WU08 396 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 CCT8L2Q96SF2 557 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 RBM15Q96T37 977 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMG1-205ENST00000561947 SELENOSQ9BQE4 189 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 DPEP3Q9H4B8 488 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 RSAD1Q9HA92 442 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 RRP15Q9Y3B9 282 aaKnown RBP10.28□□□□□ -0.76
SMG1-205ENST00000561947 GMNCA6NCL1 334 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 KPNA7A9QM74 516 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 APOC4-APOC2K7ER74 178 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 TNPO2O14787 897 aaKnown RBP10.28□□□□□ -0.76
SMG1-205ENST00000561947 PRPSAP2O60256 369 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 GRAP2O75791 330 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 IFNB1P01574 187 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 APOC2P02655 101 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 ABHD2P08910 425 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 MAGEA4P43358 317 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 SNX16P57768 344 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 PDE4CQ08493 712 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 CCDC14Q49A88 953 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 RNASEH2BQ5TBB1 312 aaKnown RBP10.28□□□□□ -0.76
SMG1-205ENST00000561947 RGMBQ6NW40 437 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 C7orf31Q8N865 590 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 MDM1Q8TC05 714 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 KBTBD7Q8WVZ9 684 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 C9orf72Q96LT7 481 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 RNF39Q9H2S5 420 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 NMRK2Q9NPI5 230 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 GDAP2Q9NXN4 497 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 SHOC2Q9UQ13 582 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 IPPQ9Y573 584 aa10.28□□□□□ -0.76
SMG1-205ENST00000561947 SPTLC1O15269 473 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 HCRTO43612 131 aa10.27□□□□□ -0.77
SMG1-205ENST00000561947 FGFR1P11362 822 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms