RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 IKBKBO14920 756 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 LILRB5O75023 590 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 USP17L7P0C7H9 530 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 ARSAP15289 507 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 ANXA13P27216 316 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 RAP1GAPP47736 663 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 CXCL12P48061 93 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 CCR3P51677 355 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 NOP14P78316 857 aaKnown RBP10.96□□□□□ -0.65
CLK3-205ENST00000561673 SATB1Q01826 763 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 CCINQ13939 588 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 LRRC32Q14392 662 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 ZNF77Q15935 545 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 SGSM1Q2NKQ1 1148 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 ZACNQ401N2 412 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 ZNF667Q5HYK9 610 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 DGKKQ5KSL6 1271 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 C1orf220Q5T0J3 134 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 CC2D1AQ6P1N0 951 aaPredicted RBP10.96□□□□□ -0.65
CLK3-205ENST00000561673 Q6ZS52 159 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 SV2AQ7L0J3 742 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 SPEM1Q8N4L4 309 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 TTC16Q8NEE8 873 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 TMC2Q8TDI7 906 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 CCDC47Q96A33 483 aaKnown RBP10.96□□□□□ -0.65
CLK3-205ENST00000561673 CHFRQ96EP1 664 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 C8orf48Q96LL4 319 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 TTLL2Q9BWV7 592 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 FAM126AQ9BYI3 521 aaPredicted RBP10.96□□□□□ -0.65
CLK3-205ENST00000561673 ZNF518BQ9C0D4 1074 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 SDCBP2Q9H190 292 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 RYDENQ9NUL5 291 aaKnown RBP10.96□□□□□ -0.65
CLK3-205ENST00000561673 C2orf42Q9NWW7 574 aa10.96□□□□□ -0.65
CLK3-205ENST00000561673 ZNF840PA6NDX5 716 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 AKAP3O75969 853 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 CLSTN1O94985 981 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 KIF20AO95235 890 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 CKMP06732 381 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 HDCP19113 662 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 NRLP54845 237 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 ZXDBP98169 803 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 KCNB1Q14721 858 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 PPP2R5DQ14738 602 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 MTF1Q14872 753 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 PDGFRLQ15198 375 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 NFIL3Q16649 462 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 SCARA5Q6ZMJ2 495 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 PAQR9Q6ZVX9 377 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 SYNPOQ8N3V7 929 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 DCLK2Q8N568 766 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 SH3RF2Q8TEC5 729 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 OSCP1Q8WVF1 389 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 RUBCNQ92622 972 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 ELOVL4Q9GZR5 314 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 DUS2Q9NX74 493 aaKnown RBP10.95□□□□□ -0.66
CLK3-205ENST00000561673 EHD2Q9NZN4 543 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 TRPM5Q9NZQ8 1165 aa10.95□□□□□ -0.66
CLK3-205ENST00000561673 NUP210Q8TEM1 1887 aaPredicted RBP10.95□□□□□ -0.66
CLK3-205ENST00000561673 PATJQ8NI35 1801 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 TRDMT1O14717 391 aaKnown RBP10.94□□□□□ -0.66
CLK3-205ENST00000561673 MAPK13O15264 365 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 P4HA1P13674 534 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 NR2F2P24468 414 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 PPP3CCP48454 512 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 GALK1P51570 392 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 VAMP7P51809 220 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 DMWDQ09019 674 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 GRSF1Q12849 480 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLK3-205ENST00000561673 TAF10Q12962 218 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 USP4Q13107 963 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 ADAM9Q13443 819 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 TMEM196Q5HYL7 178 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 SPOPLQ6IQ16 392 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 FSTL4Q6MZW2 842 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 ACOT1Q86TX2 421 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 KIAA2013Q8IYS2 634 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 FMR1NBQ8N0W7 255 aaPredicted RBP10.94□□□□□ -0.66
CLK3-205ENST00000561673 NUP93Q8N1F7 819 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 GUF1Q8N442 669 aaKnown RBP10.94□□□□□ -0.66
CLK3-205ENST00000561673 TNIP3Q96KP6 325 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 KCNK16Q96T55 309 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 HINFPQ9BQA5 517 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 EPC1Q9H2F5 836 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 LINC00597Q9H2U6 94 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 ECT2Q9H8V3 914 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 FBRSL1Q9HCM7 1045 aaKnown RBP10.94□□□□□ -0.66
CLK3-205ENST00000561673 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.94□□□□□ -0.665e-8■■■■■ 225.4
CLK3-205ENST00000561673 ARHGAP26Q9UNA1 814 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 WNT6Q9Y6F9 365 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 GVINP1Q7Z2Y8 2422 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 FAM186AA6NE01 2351 aa10.94□□□□□ -0.66
CLK3-205ENST00000561673 EP300Q09472 2414 aaPredicted RBP10.93□□□□□ -0.66
CLK3-205ENST00000561673 K7ESF4 209 aa10.93□□□□□ -0.66
CLK3-205ENST00000561673 LEFTY2O00292 366 aa10.93□□□□□ -0.66
CLK3-205ENST00000561673 PAPSS2O95340 614 aaPredicted RBP10.93□□□□□ -0.66
CLK3-205ENST00000561673 ABL1P00519 1130 aa10.93□□□□□ -0.66
CLK3-205ENST00000561673 ASS1P00966 412 aaKnown RBP10.93□□□□□ -0.66
CLK3-205ENST00000561673 HLA-DRAP01903 254 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms