RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 CREG2Q8IUH2 290 aa10.58□□□□□ -0.72
GTF3C1-202ENST00000561623 CLVS1Q8IUQ0 354 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-202ENST00000561623 ZSWIM2Q8NEG5 633 aa10.58□□□□□ -0.72
GTF3C1-202ENST00000561623 TLR10Q9BXR5 811 aa10.58□□□□□ -0.72
GTF3C1-202ENST00000561623 SCAF8Q9UPN6 1271 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-202ENST00000561623 C5orf58C9J3I9 102 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 CYP11B2P19099 503 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 NPEPPSP55786 919 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 IRGCQ6NXR0 463 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 RNF148Q8N7C7 305 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF513Q8N8E2 541 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 OXNAD1Q96HP4 312 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 THUMPD3Q9BV44 507 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 NDEL1Q9GZM8 345 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 KCTD10Q9H3F6 313 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 CYP4F12Q9HCS2 524 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 DCDC2Q9UHG0 476 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 PTGER2P43116 358 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 KCNJ2P63252 427 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 AARS2Q5JTZ9 985 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 ANKRD27Q96NW4 1050 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 MMP19Q99542 508 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 GRIP2Q9C0E4 1043 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 JMJD4Q9H9V9 463 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 ENTPD7Q9NQZ7 604 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF263O14978 683 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 NDUFS3O75489 264 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 RPA1P27694 616 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 TSHZ1Q6ZSZ6 1077 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 OR8H2Q8N162 312 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 TTC39CQ8N584 583 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 TDRD5Q8NAT2 981 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 UNKQ9C0B0 810 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 CYP39A1Q9NYL5 469 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 RPS6KL1Q9Y6S9 549 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 KCNQ2O43526 872 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 ECE2O60344 883 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF189O75820 626 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 NEDD8Q15843 81 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 SEZ6Q53EL9 994 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 TCP10LQ8TDR4 215 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 PKP3Q9Y446 797 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 COL15A1P39059 1388 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 NR5A2O00482 541 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 HNRNPRO43390 633 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 RALBP11234 206 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 ATP6V1B2P21281 511 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 TGM2P21980 687 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 GSTT1P30711 240 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 SLC20A2Q08357 652 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 GOLGA7BQ2TAP0 167 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 LUZP2Q86TE4 346 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 SLC47A2Q86VL8 602 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF677Q86XU0 584 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 TMPRSS6Q8IU80 811 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 TUBGCP3Q96CW5 907 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 NOL6Q9H6R4 1146 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 SYBUQ9NX95 663 aa10.57□□□□□ -0.72
GTF3C1-202ENST00000561623 PIK3CDO00329 1044 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SUPT7LO94864 414 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 OCM2P0CE71 109 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 OCMP0CE72 109 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 MYBL2P10244 700 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 RASA1P20936 1047 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SEL1L3Q68CR1 1132 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 PYDC1Q8WXC3 89 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 JADE3Q92613 823 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SH3KBP1Q96B97 665 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 HES6Q96HZ4 224 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 CNOT7Q9UIV1 285 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 NEO1Q92859 1461 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 PDE2AO00408 941 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 TBX3O15119 743 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 TM9SF1O15321 606 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 MED24O75448 989 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 CYP11B1P15538 503 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 PDK1Q15118 436 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 KRT35Q92764 455 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 CDC42BPBQ9Y5S2 1711 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF839A8K0R7 811 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 DGAT1O75907 488 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 MAPRE1Q15691 268 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 PKN2Q16513 984 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 GALNTL6Q49A17 601 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SBK1Q52WX2 424 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SLC7A14Q8TBB6 771 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 TFB1MQ8WVM0 346 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 GPATCH2LQ9NWQ4 482 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 PXDNLA1KZ92 1463 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 IQSEC2Q5JU85 1478 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 CCL15-CCL14A0A0B4J2E2 113 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 P4HA2O15460 535 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 PSMG1O95456 288 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 MT-CO1P00395 513 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SHBGP04278 402 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 EFNA5P52803 228 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 CCL15Q16663 113 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SLC5A5Q92911 643 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms