RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 STK3Q13188 491 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 GRAMD1BQ3KR37 738 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 DGKKQ5KSL6 1271 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 C10orf62Q5T681 223 aaPredicted RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 METRNLQ641Q3 311 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 FOXR2Q6PJQ5 311 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 USP51Q70EK9 711 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 BEND5Q7L4P6 421 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 MRGPREQ86SM8 312 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 USP37Q86T82 979 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 CELF5Q8N6W0 485 aaKnown RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 SLC17A8Q8NDX2 589 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 VPS37AQ8NEZ2 397 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 SMCR8Q8TEV9 937 aaPredicted RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 TRIM43Q96BQ3 446 aaPredicted RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 IQCDQ96DY2 449 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 SLC39A13Q96H72 371 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 SGCZQ96LD1 299 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 DCLRE1CQ96SD1 692 aaKnown RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 PNKPQ96T60 521 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 SMOQ99835 787 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 COLEC11Q9BWP8 271 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 BRIP1Q9BX63 1249 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 EIF2AQ9BY44 585 aaKnown RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 TINAGL1Q9GZM7 467 aaPredicted RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 IKZF4Q9H2S9 585 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 RNPEPQ9H4A4 650 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 A1CFQ9NQ94 594 aaKnown RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 FBXO34Q9NWN3 711 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 CPNE7Q9UBL6 633 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 ATP11BQ9Y2G3 1177 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 NEU2Q9Y3R4 380 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 CHST2Q9Y4C5 530 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 CEP152O94986 1710 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 XRN1Q8IZH2 1706 aaKnown RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 NHSL1Q5SYE7 1610 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 TNS3Q68CZ2 1445 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 RRBP1Q9P2E9 1410 aaKnown RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 AATKQ6ZMQ8 1374 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 CENPVL1A0A0U1RR11 272 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 MBD3L4A6NDZ8 208 aaPredicted RBP4.45□□□□□ -1.7
HERC1-215ENST00000561436 MBD3L3A6NE82 208 aaPredicted RBP4.45□□□□□ -1.7
HERC1-215ENST00000561436 DRGXA6NNA5 263 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 F5H423 210 aaPredicted RBP4.45□□□□□ -1.7
HERC1-215ENST00000561436 IFRD1O00458 451 aaPredicted RBP4.45□□□□□ -1.7
HERC1-215ENST00000561436 CYR61O00622 381 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 APOL1O14791 398 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 ABHD16AO95870 558 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 CYP2C9P11712 490 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 CKBP12277 381 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 KLRC1P26715 233 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 SLC6A4P31645 630 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 CHAF1AQ13111 956 aaPredicted RBP4.45□□□□□ -1.7
HERC1-215ENST00000561436 GRM1Q13255 1194 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 FAM209BQ5JX69 171 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 IZUMO3Q5VZ72 239 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 FAM160B1Q5W0V3 765 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 XRRA1Q6P2D8 792 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 GDF7Q7Z4P5 450 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 COL23A1Q86Y22 540 aaPredicted RBP4.45□□□□□ -1.7
HERC1-215ENST00000561436 YAF2Q8IY57 180 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 DNAJC5GQ8N7S2 189 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 PROKR1Q8TCW9 393 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 BRI3BPQ8WY22 251 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 ARPC5LQ9BPX5 153 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 DPH1Q9BZG8 443 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 RNF181Q9P0P0 153 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 CDYLQ9Y232 598 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 COL22A1Q8NFW1 1626 aaPredicted RBP4.45□□□□□ -1.7
HERC1-215ENST00000561436 SPATA31A1Q5TZJ5 1347 aa4.45□□□□□ -1.7
HERC1-215ENST00000561436 CHD2O14647 1828 aaKnown RBP4.44□□□□□ -1.7
HERC1-215ENST00000561436 XIRP1Q702N8 1843 aaKnown RBP4.44□□□□□ -1.7
HERC1-215ENST00000561436 NRXN1Q9ULB1 1477 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 BRD4O60885 1362 aaPredicted RBP4.44□□□□□ -1.7
HERC1-215ENST00000561436 ABHD14A-ACY1A0A1B0GW23 586 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 POLRMTO00411 1230 aaKnown RBP4.44□□□□□ -1.7
HERC1-215ENST00000561436 TRIM24O15164 1050 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 SOAT2O75908 522 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 ANXA2P07355 339 aaKnown RBP4.44□□□□□ -1.7
HERC1-215ENST00000561436 PIM1P11309 404 aaPredicted RBP4.44□□□□□ -1.7
HERC1-215ENST00000561436 IDEP14735 1019 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 MAKP20794 623 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 GCSHP23434 173 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 TECP42680 631 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 MAPK10P53779 464 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 RPS16P62249 146 aaKnown RBP4.44□□□□□ -1.7
HERC1-215ENST00000561436 TNFAIP2Q03169 654 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 PDCD2Q16342 344 aaPredicted RBP4.44□□□□□ -1.7
HERC1-215ENST00000561436 FAM102AQ5T9C2 384 aaPredicted RBP4.44□□□□□ -1.7
HERC1-215ENST00000561436 TSHZ3Q63HK5 1081 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 LAYNQ6UX15 382 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 RNF44Q7L0R7 432 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 SESTD1Q86VW0 696 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 LDLRAD3Q86YD5 345 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 LIX1LQ8IVB5 337 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 RHOT2Q8IXI1 618 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 SLC15A4Q8N697 577 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 ATP11CQ8NB49 1132 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 FANCBQ8NB91 859 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms