RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 DENND5BQ6ZUT9 1274 aa28.88■■■□□ 2.21
SNRPA1-215ENST00000561187 NXF1Q9UBU9 619 aaKnown RBP28.88■■■□□ 2.21
SNRPA1-215ENST00000561187 HELZP42694 1942 aaKnown RBP28.88■■■□□ 2.21
SNRPA1-215ENST00000561187 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 ABL1P00519 1130 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 HDCP19113 662 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 CNR2P34972 360 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 GNL1P36915 607 aaPredicted RBP28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 CACNA2D1P54289 1103 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 MYL6P60660 151 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 EHHADHQ08426 723 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 MAPRE1Q15691 268 aaKnown RBP28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 EML3Q32P44 896 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 CNNM4Q6P4Q7 775 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 VSTM1Q6UX27 236 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 RPLP0P6Q8NHW5 317 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 MYCBPAPQ8TBZ2 947 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 ZNF516Q92618 1163 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 ZNF518BQ9C0D4 1074 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 GZF1Q9H116 711 aaPredicted RBP28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 FAM13BQ9NYF5 915 aa28.87■■■□□ 2.21
SNRPA1-215ENST00000561187 SOBPA7XYQ1 873 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 CLDN5O00501 218 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 AMPD2Q01433 879 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 TRPC3Q13507 836 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 SCARA5Q6ZMJ2 495 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 PRR23CQ6ZRP0 262 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 EZH1Q92800 747 aaPredicted RBP28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 ATP2A3Q93084 1043 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 SNX21Q969T3 373 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 LINC00597Q9H2U6 94 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 MAGEF1Q9HAY2 307 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 SMPD4Q9NXE4 827 aa28.86■■■□□ 2.21
SNRPA1-215ENST00000561187 AXIN1O15169 862 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 GDF9O60383 454 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 EXOC3O60645 756 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 CCDC192P0DO97 292 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 RAP1GAPP47736 663 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 BIRC3Q13489 604 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 RESP18Q5W5W9 173 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 PLEKHO2Q8TD55 490 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 CD101Q93033 1021 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 SPATA17Q96L03 361 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 SMYD3Q9H7B4 428 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 TMEM30AQ9NV96 361 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 TRPM5Q9NZQ8 1165 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 SPAG17Q6Q759 2223 aa28.85■■■□□ 2.21
SNRPA1-215ENST00000561187 TRIM66O15016 1216 aa28.84■■■□□ 2.21
SNRPA1-215ENST00000561187 PHACTR2O75167 634 aa28.84■■■□□ 2.21
SNRPA1-215ENST00000561187 RPP40O75818 363 aaKnown RBP28.84■■■□□ 2.21
SNRPA1-215ENST00000561187 DRD1P21728 446 aa28.84■■■□□ 2.21
SNRPA1-215ENST00000561187 KCNA4P22459 653 aa28.84■■■□□ 2.21
SNRPA1-215ENST00000561187 ZXDBP98169 803 aa28.84■■■□□ 2.21
SNRPA1-215ENST00000561187 DNM1Q05193 864 aaKnown RBP28.84■■■□□ 2.21
SNRPA1-215ENST00000561187 SERTAD1Q9UHV2 236 aa28.84■■■□□ 2.21
SNRPA1-215ENST00000561187 ARHGAP26Q9UNA1 814 aa28.84■■■□□ 2.21
SNRPA1-215ENST00000561187 MYO16Q9Y6X6 1858 aa28.83■■■□□ 2.21
SNRPA1-215ENST00000561187 A8MXQ7 604 aa28.83■■■□□ 2.21
SNRPA1-215ENST00000561187 ATG13O75143 517 aa28.83■■■□□ 2.21
SNRPA1-215ENST00000561187 PTPN1P18031 435 aaKnown RBP28.83■■■□□ 2.21
SNRPA1-215ENST00000561187 SDHBP21912 280 aa28.83■■■□□ 2.21
SNRPA1-215ENST00000561187 SEC13P55735 322 aa28.83■■■□□ 2.21
SNRPA1-215ENST00000561187 KBTBD6Q86V97 674 aa28.83■■■□□ 2.21
SNRPA1-215ENST00000561187 GAB3Q8WWW8 586 aa28.83■■■□□ 2.21
SNRPA1-215ENST00000561187 LEFTY2O00292 366 aa28.82■■■□□ 2.2
SNRPA1-215ENST00000561187 TACC1O75410 805 aa28.82■■■□□ 2.2
SNRPA1-215ENST00000561187 HOXA6P31267 233 aa28.82■■■□□ 2.2
SNRPA1-215ENST00000561187 KNOP1Q1ED39 458 aaKnown RBP28.82■■■□□ 2.2
SNRPA1-215ENST00000561187 BMT2Q1RMZ1 405 aa28.82■■■□□ 2.2
SNRPA1-215ENST00000561187 CEP57L1Q8IYX8 460 aa28.82■■■□□ 2.2
SNRPA1-215ENST00000561187 RTKNQ9BST9 563 aa28.82■■■□□ 2.2
SNRPA1-215ENST00000561187 ARRDC1-AS1Q9H2J1 176 aa28.82■■■□□ 2.2
SNRPA1-215ENST00000561187 EML5Q05BV3 1969 aa28.82■■■□□ 2.2
SNRPA1-215ENST00000561187 ANTXRLA6NF34 631 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 CDH8P55286 799 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 TAF10Q12962 218 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 SF3A2Q15428 464 aaKnown RBP28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 CSRP2Q16527 193 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 TDRD10Q5VZ19 366 aaKnown RBP28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 B3GALNT2Q8NCR0 500 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 NETO1Q8TDF5 533 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 CHAMP1Q96JM3 812 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 B3GNT5Q9BYG0 378 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 XYLT2Q9H1B5 865 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 SMOC1Q9H4F8 434 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 CPQQ9Y646 472 aa28.81■■■□□ 2.2
SNRPA1-215ENST00000561187 ZNF840PA6NDX5 716 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 LRRIQ3A6PVS8 624 aaPredicted RBP28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 LRP3O75074 770 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 ZNF699Q32M78 642 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 FILIP1Q7Z7B0 1213 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 C8orf48Q96LL4 319 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 TTLL2Q9BWV7 592 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 ELOVL4Q9GZR5 314 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 RNF38Q9H0F5 515 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 EXOC1Q9NV70 894 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 KIAA1549LQ6ZVL6 1849 aa28.8■■■□□ 2.2
SNRPA1-215ENST00000561187 PVALEFA0A1B0GWK0 134 aa28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 NFATC1O95644 943 aa28.79■■■□□ 2.2
SNRPA1-215ENST00000561187 PDE6CP51160 858 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms