RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ATP8B3O60423 1300 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 F5P12259 2224 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 ZNF638Q14966 1978 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 FAM92AA1XBS5 289 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 KRBA1A5PL33 1030 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 HEPACAM2A8MVW5 462 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 TBXAS1P24557 533 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 DDX6P26196 483 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 ADORA2BP29275 332 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 CETN1Q12798 172 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 TPD52L1Q16890 204 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 MIIPQ5JXC2 388 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 ARHGAP17Q68EM7 881 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 PHLDB3Q6NSJ2 640 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 CLEC20AQ6ZU45 233 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 MFSD6LQ8IWD5 586 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 CMTM8Q8IZV2 173 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 NUP93Q8N1F7 819 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 MAB21L3Q8N8X9 362 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 HEXIM2Q96MH2 286 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 KREMEN1Q96MU8 473 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 GCNAQ96QF7 691 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 SLC22A12Q96S37 553 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 INTS2Q9H0H0 1204 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 GCNT4Q9P109 453 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 ZMYM5Q9UJ78 669 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 ANAPC1Q9H1A4 1944 aa16.19■□□□□ 0.18
SNRPA1-213ENST00000560856 RNF225M0QZC1 329 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 CFHP08603 1231 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 NPR3P17342 541 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 MTIF2P46199 727 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 GCNT1Q02742 428 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 TAF10Q12962 218 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 GRM2Q14416 872 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 MAN2A1Q16706 1144 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 HSP90AA4PQ58FG1 418 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 DPY19L2P1Q6NXN4 242 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 RRAGAQ7L523 313 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 CREBRFQ8IUR6 639 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 PPM1KQ8N3J5 372 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 SCAMP5Q8TAC9 235 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 MRPS31Q92665 395 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 PBXIP1Q96AQ6 731 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 E2F7Q96AV8 911 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 CRACR2AQ9BSW2 395 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 ANO10Q9NW15 660 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 OBP2AQ9NY56 170 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 NFE2L3Q9Y4A8 694 aa16.18■□□□□ 0.18
SNRPA1-213ENST00000560856 GTPBP10A4D1E9 387 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 ZNF840PA6NDX5 716 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 ARNTLO00327 626 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 FAM200BP0CF97 657 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 PSMC3P17980 439 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 SLC9A1P19634 815 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 SLC5A3P53794 718 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 MAP3K7CLP57077 242 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 YWHAEP62258 255 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 APBA1Q02410 837 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 FCHO2Q0JRZ9 810 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 STX1AQ16623 288 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 CDKAL1Q5VV42 579 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 SASS6Q6UVJ0 657 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 GPRIN1Q7Z2K8 1008 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 FAM114A1Q8IWE2 563 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 FBXL6Q8N531 539 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 RIN3Q8TB24 985 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 DEPDC1BQ8WUY9 529 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 USP13Q92995 863 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 CYP2S1Q96SQ9 504 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 ZSWIM1Q9BR11 485 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 DUSP16Q9BY84 665 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 SMG9Q9H0W8 520 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 COMMD8Q9NX08 183 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 EHD2Q9NZN4 543 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 CNTN6Q9UQ52 1028 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 CCL26Q9Y258 94 aa16.17■□□□□ 0.18
SNRPA1-213ENST00000560856 NUP210Q8TEM1 1887 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 C2orf78A6NCI8 922 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 SHISA7A6NL88 538 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 KCNJ18B7U540 433 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 RTN3O95197 1032 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 ZDHHC11BP0C7U3 371 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 PON1P27169 355 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 YWHAQP27348 245 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 PGFP49763 221 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 ZNF132P52740 706 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 TYRO3Q06418 890 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 KCNJ12Q14500 433 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 NCAPHQ15003 741 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 VWA3BQ502W6 1294 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 TCP11X2Q5H9J9 407 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 CAVIN1Q6NZI2 390 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 TRIM65Q6PJ69 517 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 GBP6Q6ZN66 633 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 TTC30AQ86WT1 665 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 TFAP2BQ92481 460 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 TUBGCP2Q9BSJ2 902 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 TRMT61BQ9BVS5 477 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 NDST4Q9H3R1 872 aa16.16■□□□□ 0.18
SNRPA1-213ENST00000560856 SIX2Q9NPC8 291 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms