RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 C2orf78A6NCI8 922 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 K7EQS6 105 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 GABRDO14764 452 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 PPP1R37O75864 691 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 GCNT3O95395 438 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 APODP05090 189 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 GRIK1P39086 918 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 TXLNAP40222 546 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 OPRD1P41143 372 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 FAM171BQ6P995 826 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 CCDC33Q8N5R6 958 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 MDGA1Q8NFP4 955 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 WHAMMQ8TF30 809 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 SAAL1Q96ER3 474 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 KIF2CQ99661 725 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 SYT15Q9BQS2 421 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 POLMQ9NP87 494 aaPredicted RBP12.89□□□□□ -0.35
MARK3-221ENST00000560603 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
MARK3-221ENST00000560603 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
MARK3-221ENST00000560603 SPEGQ15772 3267 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 LEFTY2O00292 366 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 CDX4O14627 284 aaPredicted RBP12.88□□□□□ -0.35
MARK3-221ENST00000560603 TNFRSF10BO14763 440 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 TRIM66O15016 1216 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
MARK3-221ENST00000560603 BCKDHBP21953 392 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 RDXP35241 583 aaKnown RBP12.88□□□□□ -0.35
MARK3-221ENST00000560603 EIF2DP41214 584 aaKnown RBP12.88□□□□□ -0.35
MARK3-221ENST00000560603 IRX4P78413 519 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 SURF1Q15526 300 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 PREPLQ4J6C6 727 aaPredicted RBP12.88□□□□□ -0.35
MARK3-221ENST00000560603 TRIM61Q5EBN2 209 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 SPDYCQ5MJ68 293 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 EOGTQ5NDL2 527 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 DENND5BQ6ZUT9 1274 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 SV2BQ7L1I2 683 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 OSTM1Q86WC4 334 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 DDX42Q86XP3 938 aaKnown RBP eCLIP12.88□□□□□ -0.35
MARK3-221ENST00000560603 NOC3LQ8WTT2 800 aaKnown RBP12.88□□□□□ -0.35
MARK3-221ENST00000560603 PNKPQ96T60 521 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 STRA6Q9BX79 667 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 IKZF4Q9H2S9 585 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 BCCIPQ9P287 314 aaKnown RBP eCLIP12.88□□□□□ -0.35
MARK3-221ENST00000560603 PCNX2A6NKB5 2137 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 ANAPC1Q9H1A4 1944 aa12.88□□□□□ -0.35
MARK3-221ENST00000560603 DMXL2Q8TDJ6 3036 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.87□□□□□ -0.35
MARK3-221ENST00000560603 PATE3B3GLJ2 98 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 ADH1CP00326 375 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 TNNC2P02585 160 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 BDNFP23560 247 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 HOXD12P35452 270 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 P2RY2P41231 377 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 PI4KAP42356 2102 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 ATXN3P54252 364 aaPredicted RBP12.87□□□□□ -0.35
MARK3-221ENST00000560603 SLC7A9P82251 487 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 CYP27A1Q02318 531 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 GRIN1Q05586 938 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 RESTQ13127 1097 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 SF3A1Q15459 793 aaKnown RBP12.87□□□□□ -0.35
MARK3-221ENST00000560603 SOWAHAQ2M3V2 549 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 RRAGBQ5VZM2 374 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
MARK3-221ENST00000560603 NUDT18Q6ZVK8 323 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 FILIP1Q7Z7B0 1213 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 SYT12Q8IV01 421 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 ADGRG2Q8IZP9 1017 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 DEFB124Q8NES8 71 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 OLIG1Q8TAK6 271 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 MYLPFQ96A32 169 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 HPDLQ96IR7 371 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 TMX3Q96JJ7 454 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 SCNM1Q9BWG6 230 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 MTMR12Q9C0I1 747 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 OLFML3Q9NRN5 406 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 SIX4Q9UIU6 781 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 RALYQ9UKM9 306 aaKnown RBP12.87□□□□□ -0.35
MARK3-221ENST00000560603 WASF3Q9UPY6 502 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
MARK3-221ENST00000560603 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
MARK3-221ENST00000560603 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 GOLGA8IPA6NC78 632 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 ZNF840PA6NDX5 716 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 ZNF233A6NK53 670 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 GOLGA8JA6NMD2 632 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 KLF8O95600 359 aaPredicted RBP12.86□□□□□ -0.35
MARK3-221ENST00000560603 ABL1P00519 1130 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 CYP17A1P05093 508 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 IDEP14735 1019 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 SPINK2P20155 84 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 TIE1P35590 1138 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 GRIA2P42262 883 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 TNFRSF4P43489 277 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 MAPK8P45983 427 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 WNT7BP56706 349 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 NOP14P78316 857 aaKnown RBP12.86□□□□□ -0.35
MARK3-221ENST00000560603 KCNA1Q09470 495 aa12.86□□□□□ -0.35
MARK3-221ENST00000560603 DHCR24Q15392 516 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms