RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 PCMTD1Q96MG8 357 aaPredicted RBP16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 NAP1L5Q96NT1 182 aaPredicted RBP16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 UHRF1Q96T88 793 aaPredicted RBP16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 ZSWIM1Q9BR11 485 aa16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 GANQ9H2C0 597 aa16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 IL21Q9HBE4 155 aa16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 CD320Q9NPF0 282 aa16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 ACP6Q9NPH0 428 aa16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 RTN4Q9NQC3 1192 aaKnown RBP16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 FAM207AQ9NSI2 230 aaPredicted RBP16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 CNTN6Q9UQ52 1028 aa16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 NR2E1Q9Y466 385 aa16.44■□□□□ 0.22
LYSMD2-204ENST00000560491 C19orf67A6NJJ6 358 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 SERPINC1P01008 464 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 PAEPP09466 180 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 VDRP11473 427 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 UCHL3P15374 230 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 BRD2P25440 801 aaKnown RBP16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 SSTR3P32745 418 aaPredicted RBP16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 USP8P40818 1118 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 IFRD2Q12894 506 aaPredicted RBP16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 RAPGEF1Q13905 1077 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 DENND5BQ6ZUT9 1274 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 GAREM2Q75VX8 874 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 OTOP3Q7RTS5 596 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 TTC30AQ86WT1 665 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 NPAS3Q8IXF0 933 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 LEMD2Q8NC56 503 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 ST13P5Q8NFI4 369 aaPredicted RBP16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 FGF13Q92913 245 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 ERGIC2Q96RQ1 377 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 NAA15Q9BXJ9 866 aaKnown RBP16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 GPR88Q9GZN0 384 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 CSNK1G1Q9HCP0 422 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 PLCB1Q9NQ66 1216 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 TSPAN16Q9UKR8 245 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 USTQ9Y2C2 406 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 ANAPC1Q9H1A4 1944 aa16.43■□□□□ 0.22
LYSMD2-204ENST00000560491 A0A1B0GTH6 734 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 O00370 1275 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 ZNF197O14709 1029 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 TADA3O75528 432 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 NPR3P17342 541 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 CYP4F8P98187 520 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 FANCCQ00597 558 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 DRAP1Q14919 205 aaPredicted RBP16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 FILIP1LQ4L180 1135 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 STXBP5Q5T5C0 1151 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 ACSF2Q96CM8 615 aaPredicted RBP16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 MCRS1Q96EZ8 462 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 DUSP16Q9BY84 665 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 ATXN3LQ9H3M9 355 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 CDH7Q9ULB5 785 aa16.42■□□□□ 0.22
LYSMD2-204ENST00000560491 FOXN3O00409 490 aaPredicted RBP16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 TNFRSF10BO14763 440 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 CYP26A1O43174 497 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 LAMP2P13473 410 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 RFX1P22670 979 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 SLC5A3P53794 718 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 POLR2FP61218 127 aaKnown RBP16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 GPRIN1Q7Z2K8 1008 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 TMEM150AQ86TG1 271 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 GJD3Q8N144 294 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 NUP93Q8N1F7 819 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 SCAMP5Q8TAC9 235 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 UBA3Q8TBC4 463 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 TRMT2BQ96GJ1 504 aaKnown RBP16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 MYRFLQ96LU7 910 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 NLRC4Q9NPP4 1024 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 KIAA1257Q9ULG3 409 aa16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 NUP210Q8TEM1 1887 aaPredicted RBP16.41■□□□□ 0.22
LYSMD2-204ENST00000560491 A0A0C4DFX4 3053 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 HHLA1C9JL84 531 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 TULP2O00295 520 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 MICAL2O94851 1124 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 F11P03951 625 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 CDC25CP30307 473 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 GNA15P30679 374 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 NR1I3Q14994 352 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 LCLAT1Q6UWP7 414 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 GPIHBP1Q8IV16 184 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 ANKRD52Q8NB46 1076 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 NEK11Q8NG66 645 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 CEP295NLQ96MC4 621 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 ZSWIM3Q96MP5 696 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 GCNAQ96QF7 691 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 TTLL2Q9BWV7 592 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 EPS15L1Q9UBC2 864 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 UXTQ9UBK9 157 aaPredicted RBP16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 HESX1Q9UBX0 185 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 LIMD1Q9UGP4 676 aa16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
LYSMD2-204ENST00000560491 F8VZ95 297 aa16.39■□□□□ 0.21
LYSMD2-204ENST00000560491 M0QYV0 167 aa16.39■□□□□ 0.21
LYSMD2-204ENST00000560491 THAP12O43422 761 aa16.39■□□□□ 0.21
LYSMD2-204ENST00000560491 FGF19O95750 216 aa16.39■□□□□ 0.21
LYSMD2-204ENST00000560491 ASGR2P07307 311 aa16.39■□□□□ 0.21
LYSMD2-204ENST00000560491 BCAT1P54687 386 aa16.39■□□□□ 0.21
LYSMD2-204ENST00000560491 UBASH3AP57075 661 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms