RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SOX5P35711 763 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 TECP42680 631 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 CD151P48509 253 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 SERPINB8P50452 374 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 RAP1GDS1P52306 607 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 RBM5P52756 815 aaKnown RBP eCLIP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 DEUP1Q05D60 604 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 C19orf57Q0VDD7 668 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PABPC4Q13310 644 aaKnown RBP eCLIP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 HNRNPDQ14103 355 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 ZYXQ15942 572 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 ADRM1Q16186 407 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 CALCRLQ16602 461 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 FYB2Q5VWT5 728 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 FOXB2Q5VYV0 432 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 MRM1Q6IN84 353 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 KLC3Q6P597 504 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 LRFN4Q6PJG9 635 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 CCDC137Q6PK04 289 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 MARK2Q7KZI7 788 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PHLDB2Q86SQ0 1253 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 ST13P5Q8NFI4 369 aaPredicted RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 OLIG1Q8TAK6 271 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 LNX1Q8TBB1 728 aaPredicted RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 SLC35G2Q8TBE7 412 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 WDR66Q8TBY9 1149 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 U2AF1L4Q8WU68 220 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 SDR42E1Q8WUS8 393 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 STMN2Q93045 179 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PPP2R3CQ969Q6 453 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 LENG1Q96BZ8 264 aaPredicted RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 SNF8Q96H20 258 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 RBM17Q96I25 401 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 TTC25Q96NG3 672 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PLIN2Q99541 437 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 BTBD10Q9BSF8 475 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 DDX23Q9BUQ8 820 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 STK33Q9BYT3 514 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 TRIM31Q9BZY9 425 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 KIAA1683Q9H0B3 1180 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 DENND2DQ9H6A0 471 aaPredicted RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 ERVK-5Q9HDB9 667 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 JPH1Q9HDC5 661 aaPredicted RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 KCNK9Q9NPC2 374 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PTTG2Q9NZH5 202 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 FRRS1LQ9P0K9 344 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 FETUBQ9UGM5 382 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 MAD2L2Q9UI95 211 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 ZFP69BQ9UJL9 534 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 DBR1Q9UK59 544 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 BLOC1S6Q9UL45 172 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PHTF1Q9UMS5 762 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 WDR37Q9Y2I8 494 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PPME1Q9Y570 386 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 ITGB4P16144 1822 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 SCN4AP35499 1836 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 LOXHD1Q8IVV2 1947 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 TSPY2A6NKD2 308 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 SMIM23A6NLE4 172 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 ADAMTS3O15072 1205 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 BIRC5O15392 142 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 AP1G1O43747 822 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 FKBP6O75344 327 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 TGDSO95455 350 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 STARD3NLO95772 234 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 ALBP02768 609 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 LYNP07948 512 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 EPHB2P29323 1055 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 RGS2P41220 211 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 MASP1P48740 699 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 NAPAP54920 295 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 CDK18Q07002 472 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 KIF22Q14807 665 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 RCN1Q15293 331 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 KYNUQ16719 465 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 LETM2Q2VYF4 491 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 USH1GQ495M9 461 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 C6orf163Q5TEZ5 329 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 SCARA3Q6AZY7 606 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 AAGABQ6PD74 315 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 UNC5AQ6ZN44 842 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 ACAD11Q709F0 780 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 EPM2AIP1Q7L775 607 aaPredicted RBP6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 NLRC3Q7RTR2 1065 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 DYMQ7RTS9 669 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 KRT28Q7Z3Y7 464 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 HEATR3Q7Z4Q2 680 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 NET1Q7Z628 596 aaPredicted RBP6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 ZC3H18Q86VM9 953 aaKnown RBP6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC13A5Q86YT5 568 aaPredicted RBP6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 PASD1Q8IV76 773 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 ANKRD42Q8N9B4 389 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 MIGA1Q8NAN2 632 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 SUPT20HQ8NEM7 779 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 MGARPQ8TDB4 240 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 DENND1AQ8TEH3 1009 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 RSPH1Q8WYR4 309 aa6.27□□□□□ -1.41
SNRPA1-209ENST00000560307 CD101Q93033 1021 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms