RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 ALDH9A1P49189 494 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 KIF23Q02241 960 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-218ENST00000560236 INAVAQ3KP66 663 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 KHDC1Q4VXA5 237 aaKnown RBP4.43□□□□□ -1.7
LRRC28-218ENST00000560236 TEDDM1Q5T9Z0 273 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 SLC4A10Q6U841 1118 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 C1orf162Q8NEQ5 155 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-218ENST00000560236 KLHDC4Q8TBB5 520 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 CAMKK2Q96RR4 588 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 SIK2Q9H0K1 926 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 PUS7LQ9H0K6 701 aaKnown RBP4.43□□□□□ -1.7
LRRC28-218ENST00000560236 TMA7Q9Y2S6 64 aaKnown RBP4.43□□□□□ -1.7
LRRC28-218ENST00000560236 ADGRL3Q9HAR2 1447 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 RIMS2Q9UQ26 1411 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 C1orf167Q5SNV9 1468 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 LRPPRCP42704 1394 aaKnown RBP4.42□□□□□ -1.7
LRRC28-218ENST00000560236 NEXMIFQ5QGS0 1516 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 DLC1Q96QB1 1528 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 MYOM1P52179 1685 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 QSOX1O00391 747 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 PPEF2O14830 753 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 XPOTO43592 962 aaKnown RBP4.42□□□□□ -1.7
LRRC28-218ENST00000560236 VPS4BO75351 444 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 MT-CO1P00395 513 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 TUBB4AP04350 444 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 PDHA1P08559 390 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 HSPA6P17066 643 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 SMARCA1P28370 1054 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 SNAPC2Q13487 334 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 AARS2Q5JTZ9 985 aaKnown RBP4.42□□□□□ -1.7
LRRC28-218ENST00000560236 ZNF618Q5T7W0 954 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 VPS53Q5VIR6 699 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 SDE2Q6IQ49 451 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 ANKRD16Q6P6B7 361 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 NRKQ7Z2Y5 1582 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 ZNF804AQ7Z570 1209 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 TTC7BQ86TV6 843 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 NRAPQ86VF7 1730 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 NSUN6Q8TEA1 469 aaKnown RBP4.42□□□□□ -1.7
LRRC28-218ENST00000560236 DDX17Q92841 729 aaKnown RBP4.42□□□□□ -1.7
LRRC28-218ENST00000560236 FAXDC2Q96IV6 333 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 ERBINQ96RT1 1412 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 SHANK3Q9BYB0 1731 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 ANLNQ9NQW6 1124 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 MRPS18AQ9NVS2 196 aaKnown RBP4.42□□□□□ -1.7
LRRC28-218ENST00000560236 SLC5A4Q9NY91 659 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 RAD54BQ9Y620 910 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 CFAP20Q9Y6A4 193 aaKnown RBP4.42□□□□□ -1.7
LRRC28-218ENST00000560236 NPHP3Q7Z494 1330 aa4.42□□□□□ -1.7
LRRC28-218ENST00000560236 CEP162Q5TB80 1403 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 NT5C1B-RDH14C9J2C7 533 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 PRRT4C9JH25 899 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 ZNF213O14771 459 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 PPM1DO15297 605 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 IGSF3O75054 1194 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 CLSTN1O94985 981 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 CYP2C18P33260 490 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 MMP13P45452 471 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 EEFSECP57772 596 aaKnown RBP4.41□□□□□ -1.7
LRRC28-218ENST00000560236 FHL1Q13642 323 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 GIMAP6Q6P9H5 292 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 SLC2A7Q6PXP3 512 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 CBARPQ8N350 705 aaPredicted RBP4.41□□□□□ -1.7
LRRC28-218ENST00000560236 FAM109AQ8N4B1 249 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 COA7Q96BR5 231 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 WACQ9BTA9 647 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 BRIP1Q9BX63 1249 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 FAM126AQ9BYI3 521 aaPredicted RBP4.41□□□□□ -1.7
LRRC28-218ENST00000560236 GPR35Q9HC97 309 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 SLAMF7Q9NQ25 335 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 ELOVL5Q9NYP7 299 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 USP35Q9P2H5 1018 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 IQGAP3Q86VI3 1631 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 ABCA3Q99758 1704 aa4.41□□□□□ -1.7
LRRC28-218ENST00000560236 PTPRUQ92729 1446 aa4.4□□□□□ -1.7
LRRC28-218ENST00000560236 SBF2Q86WG5 1849 aa4.4□□□□□ -1.7
LRRC28-218ENST00000560236 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 H0YIZ8 118 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 PCDHGA12O60330 932 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 KIF20AO95235 890 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 TOP3BO95985 862 aaKnown RBP4.4□□□□□ -1.71
LRRC28-218ENST00000560236 RARBP10826 455 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 POU3F3P20264 500 aaPredicted RBP4.4□□□□□ -1.71
LRRC28-218ENST00000560236 PHKA1P46020 1223 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 PIK3CGP48736 1102 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 UAP1L1Q3KQV9 507 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 TECPR1Q7Z6L1 1165 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 RGMAQ96B86 450 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 SYT17Q9BSW7 474 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 SERHLQ9NQF3 203 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 MCM8Q9UJA3 840 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 AGAP1Q9UPQ3 857 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 PCDHGA9Q9Y5G4 932 aaKnown RBP4.4□□□□□ -1.71
LRRC28-218ENST00000560236 PCDHGA8Q9Y5G5 932 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 PCDHGA7Q9Y5G6 932 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 PCDHGA6Q9Y5G7 932 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 PCDHGA3Q9Y5H0 932 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 MRFAP1Q9Y605 127 aa4.4□□□□□ -1.71
LRRC28-218ENST00000560236 THSD7AQ9UPZ6 1657 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms