RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 TRANK1O15050 2925 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 XIRP2A4UGR9 3374 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 FAM170AA1A519 330 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 C2orf78A6NCI8 922 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 ANHXE9PGG2 379 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 NOL4O94818 638 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 MICAL2O94851 1124 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 FGF19O95750 216 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 TPM2P07951 284 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 ACO1P21399 889 aaKnown RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 BRD2P25440 801 aaKnown RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 YWHAQP27348 245 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 KLK7P49862 253 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 ZNF165P49910 485 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 SLC5A3P53794 718 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 MFAP3P55082 362 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 TAF10Q12962 218 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 HTR4Q13639 388 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 NFKBIBQ15653 356 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 SGO2Q562F6 1265 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 MTSS1LQ765P7 747 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 NUP93Q8N1F7 819 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 ARL14EPQ8N8R7 260 aaPredicted RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 RBBP8NLQ8NC74 664 aaPredicted RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 ZMIZ2Q8NF64 920 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 TFAP2BQ92481 460 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 SMARCD2Q92925 531 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 FBXO32Q969P5 355 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 RSPRY1Q96DX4 576 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 SMARCD1Q96GM5 515 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 ASB16Q96NS5 453 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 LSM14BQ9BX40 385 aaKnown RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 NAT10Q9H0A0 1025 aaKnown RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 TASP1Q9H6P5 420 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 DMAP1Q9NPF5 467 aaPredicted RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 TRPM5Q9NZQ8 1165 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 IGSF9Q9P2J2 1179 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 UXTQ9UBK9 157 aaPredicted RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 METRNQ9UJH8 293 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 DNAJC12Q9UKB3 198 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 AJAP1Q9UKB5 411 aaPredicted RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 CA14Q9ULX7 337 aa9.06□□□□□ -0.96
USP3-217ENST00000560070 ZFP37Q9Y6Q3 630 aaPredicted RBP9.06□□□□□ -0.96
USP3-217ENST00000560070 PRUNE2Q8WUY3 3088 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 TMEM221A6NGB7 291 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 SMTNL1A8MU46 457 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 HEPACAM2A8MVW5 462 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 BECN2A8MW95 431 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 M0R296 226 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 TULP2O00295 520 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 PIK3R2O00459 728 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 TNFRSF10BO14763 440 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 PDGFBP01127 241 aaPredicted RBP9.05□□□□□ -0.96
USP3-217ENST00000560070 PNMA6AP0CW24 399 aaPredicted RBP9.05□□□□□ -0.96
USP3-217ENST00000560070 VDRP11473 427 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 ATP1A3P13637 1013 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 HDCP19113 662 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 EEF1GP26641 437 aaKnown RBP9.05□□□□□ -0.96
USP3-217ENST00000560070 PGFP49763 221 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 RGS7P49802 495 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 COPB1P53618 953 aaKnown RBP9.05□□□□□ -0.96
USP3-217ENST00000560070 NCAPHQ15003 741 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 ZSCAN23Q3MJ62 389 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 IER5LQ5T953 404 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 CDKAL1Q5VV42 579 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 TRIM65Q6PJ69 517 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 TRIM67Q6ZTA4 783 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 CLEC20AQ6ZU45 233 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 GPRIN1Q7Z2K8 1008 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 MON1AQ86VX9 555 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 DHX40Q8IX18 779 aaKnown RBP9.05□□□□□ -0.96
USP3-217ENST00000560070 YAF2Q8IY57 180 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 CMTM8Q8IZV2 173 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 TTC39CQ8N584 583 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 UBR7Q8N806 425 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 ANKRD20A12PQ8NF67 263 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 FLCNQ8NFG4 579 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 NDRG1Q92597 394 aaKnown RBP9.05□□□□□ -0.96
USP3-217ENST00000560070 FAXDC2Q96IV6 333 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 LRRC3BQ96PB8 259 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 SLC22A12Q96S37 553 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 DUSP16Q9BY84 665 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 GPR88Q9GZN0 384 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 SIX2Q9NPC8 291 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 ACP6Q9NPH0 428 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 GMIPQ9P107 970 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 HESX1Q9UBX0 185 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 TSPAN16Q9UKR8 245 aa9.05□□□□□ -0.96
USP3-217ENST00000560070 MYH11P35749 1972 aa9.04□□□□□ -0.96
USP3-217ENST00000560070 TCHHQ07283 1943 aa9.04□□□□□ -0.96
USP3-217ENST00000560070 ZNF840PA6NDX5 716 aa9.04□□□□□ -0.96
USP3-217ENST00000560070 HHLA1C9JL84 531 aa9.04□□□□□ -0.96
USP3-217ENST00000560070 FOXN3O00409 490 aaPredicted RBP9.04□□□□□ -0.96
USP3-217ENST00000560070 SCAMP3O14828 347 aaKnown RBP9.04□□□□□ -0.96
USP3-217ENST00000560070 ZNF263O14978 683 aa9.04□□□□□ -0.96
USP3-217ENST00000560070 CYP26A1O43174 497 aa9.04□□□□□ -0.96
USP3-217ENST00000560070 THAP12O43422 761 aa9.04□□□□□ -0.96
USP3-217ENST00000560070 ECI2O75521 394 aa9.04□□□□□ -0.96
USP3-217ENST00000560070 TADA3O75528 432 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms