RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 EGFP01133 1207 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 PRKCSHP14314 528 aaPredicted RBP21.97■■□□□ 1.11
PSEN1-225ENST00000560005 SNRPFP62306 86 aaKnown RBP21.97■■□□□ 1.11
PSEN1-225ENST00000560005 MAPK7Q13164 816 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 RUNX3Q13761 415 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 MYBPC2Q14324 1141 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 KCNJ12Q14500 433 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 ACAP1Q15027 740 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 TCP11X2Q5H9J9 407 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 SH3PXD2AQ5TCZ1 1133 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 TRIM68Q6AZZ1 485 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 SPIRE2Q8WWL2 714 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 HVCN1Q96D96 273 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 KIF12Q96FN5 646 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 GCNAQ96QF7 691 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 SEPT5Q99719 369 aaPredicted RBP21.97■■□□□ 1.11
PSEN1-225ENST00000560005 FAM83CQ9BQN1 747 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 TMEM121BQ9BXQ6 578 aaPredicted RBP21.97■■□□□ 1.11
PSEN1-225ENST00000560005 SLC46A2Q9BY10 475 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 ADAM33Q9BZ11 813 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 EBF3Q9H4W6 596 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 TMEM206Q9H813 350 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 IL21Q9HBE4 155 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 TRAF3IP3Q9Y228 551 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 TRIM49BA6NDI0 452 aa21.96■■□□□ 1.11
PSEN1-225ENST00000560005 SFI1A8K8P3 1242 aa21.96■■□□□ 1.11
PSEN1-225ENST00000560005 TRDMT1O14717 391 aaKnown RBP21.96■■□□□ 1.11
PSEN1-225ENST00000560005 TOP3BO95985 862 aaKnown RBP21.96■■□□□ 1.11
PSEN1-225ENST00000560005 GUCY2FP51841 1108 aa21.96■■□□□ 1.11
PSEN1-225ENST00000560005 CDR1P51861 262 aa21.96■■□□□ 1.11
PSEN1-225ENST00000560005 PMS1P54277 932 aaKnown RBP21.96■■□□□ 1.11
PSEN1-225ENST00000560005 DAB2IPQ5VWQ8 1189 aa21.96■■□□□ 1.11
PSEN1-225ENST00000560005 NTPCRQ9BSD7 190 aaKnown RBP21.96■■□□□ 1.11
PSEN1-225ENST00000560005 KCTD10Q9H3F6 313 aa21.96■■□□□ 1.11
PSEN1-225ENST00000560005 FBRSL1Q9HCM7 1045 aaKnown RBP21.96■■□□□ 1.11
PSEN1-225ENST00000560005 DSPP15924 2871 aaKnown RBP21.96■■□□□ 1.11
PSEN1-225ENST00000560005 A0A1B0GTH6 734 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 LNP1A1A4G5 178 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 BCLAF3A2AJT9 711 aaKnown RBP21.95■■□□□ 1.1
PSEN1-225ENST00000560005 CETN3O15182 167 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 RHOBTB1O94844 696 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 TYMPP19971 482 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 CDC25CP30307 473 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 STRN3Q13033 797 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 VEPH1Q14D04 833 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 NFIL3Q16649 462 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 ZCWPW2Q504Y3 356 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 ARMCX5Q6P1M9 558 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 HS2ST1Q7LGA3 356 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 FILIP1Q7Z7B0 1213 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 PLEKHA5Q9HAU0 1116 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 UBQLN1Q9UMX0 589 aaKnown RBP21.95■■□□□ 1.1
PSEN1-225ENST00000560005 EXOC7Q9UPT5 735 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 CCL26Q9Y258 94 aa21.95■■□□□ 1.1
PSEN1-225ENST00000560005 ATF6P18850 670 aa21.94■■□□□ 1.1
PSEN1-225ENST00000560005 GSDMDP57764 484 aa21.94■■□□□ 1.1
PSEN1-225ENST00000560005 NR1I3Q14994 352 aa21.94■■□□□ 1.1
PSEN1-225ENST00000560005 ZBTB6Q15916 424 aa21.94■■□□□ 1.1
PSEN1-225ENST00000560005 MGAT5BQ3V5L5 792 aa21.94■■□□□ 1.1
PSEN1-225ENST00000560005 CMTM8Q8IZV2 173 aa21.94■■□□□ 1.1
PSEN1-225ENST00000560005 OR10T2Q8NGX3 314 aa21.94■■□□□ 1.1
PSEN1-225ENST00000560005 ACCSQ96QU6 501 aa21.94■■□□□ 1.1
PSEN1-225ENST00000560005 HSFX1Q9UBD0 423 aa21.94■■□□□ 1.1
PSEN1-225ENST00000560005 TTC26A0AVF1 554 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 K7ENM7 598 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 PPEF2O14830 753 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 CLDN3O15551 220 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 PRPF6O94906 941 aaKnown RBP21.93■■□□□ 1.1
PSEN1-225ENST00000560005 ARSAP15289 507 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 CYP3A5P20815 502 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 NMT1P30419 496 aaKnown RBP21.93■■□□□ 1.1
PSEN1-225ENST00000560005 MATR3P43243 847 aaKnown RBP eCLIP21.93■■□□□ 1.1
PSEN1-225ENST00000560005 NCKAP1LP55160 1127 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 MCL1Q07820 350 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 KRT31Q15323 416 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 SLC39A12Q504Y0 691 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 NAIF1Q69YI7 327 aaPredicted RBP21.93■■□□□ 1.1
PSEN1-225ENST00000560005 NELFCDQ8IXH7 590 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 RPLP0P6Q8NHW5 317 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 DMXL2Q8TDJ6 3036 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 KCNN1Q92952 543 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 FIZ1Q96SL8 496 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 STRA6Q9BX79 667 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 HAPLN2Q9GZV7 340 aa21.93■■□□□ 1.1
PSEN1-225ENST00000560005 TMEM8BA6NDV4 472 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 SRRM3A6NNA2 597 aaPredicted RBP21.92■■□□□ 1.1
PSEN1-225ENST00000560005 APBB3O95704 486 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 CLTAP09496 248 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 ODC1P11926 461 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 DRD1P21728 446 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 GBP1P32455 592 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 AVPR1AP37288 418 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 TNFSF9P41273 254 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 MTIF2P46199 727 aaKnown RBP21.92■■□□□ 1.1
PSEN1-225ENST00000560005 TUFMP49411 452 aaKnown RBP21.92■■□□□ 1.1
PSEN1-225ENST00000560005 GALK1P51570 392 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 COPB1P53618 953 aaKnown RBP21.92■■□□□ 1.1
PSEN1-225ENST00000560005 GTF2BQ00403 316 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 AMPD2Q01433 879 aa21.92■■□□□ 1.1
PSEN1-225ENST00000560005 PPP2R3AQ06190 1150 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms