RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 GJC2Q5T442 439 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 FAM102AQ5T9C2 384 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ARHGAP17Q68EM7 881 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 TXNRD3NBQ6F5E7 133 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 SLC27A1Q6PCB7 646 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 C4orf22Q6V702 233 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ARHGEF18Q6ZSZ5 1173 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ARCQ7LC44 396 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 GPR142Q7Z601 462 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 PLEKHH3Q7Z736 793 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 DPP9Q86TI2 863 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ZDHHC17Q8IUH5 632 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 MAP7D3Q8IWC1 876 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 MICALL1Q8N3F8 863 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 KCTD6Q8NC69 237 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 BEST2Q8NFU1 509 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 OR6J1Q8NGC5 347 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ACTL9Q8TC94 416 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 CKAP2Q8WWK9 683 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 PRCCQ92733 491 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 KIF12Q96FN5 646 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 SGSM3Q96HU1 749 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 SNX27Q96L92 541 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 HEXIM2Q96MH2 286 aaKnown RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 TBCBQ99426 244 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 PARK7Q99497 189 aaKnown RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 TINF2Q9BSI4 451 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ADAMTS10Q9H324 1103 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 SAMD15Q9P1V8 674 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 TJP2Q9UDY2 1190 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 HMGXB4Q9UGU5 601 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 USP18Q9UMW8 372 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 NRCAMQ92823 1304 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 EXOC1LA0A1B0GW35 172 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 TMEM120BA0PK00 339 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 MBLAC1A4D2B0 266 aaPredicted RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 C2CD4BA6NLJ0 364 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 MCF2LO15068 1137 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 PRPF4O43172 522 aaKnown RBP eCLIP8.47□□□□□ -1.052e-7■■■■□ 20.5
SMAD3-212ENST00000559937 CST8O60676 142 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 NPTXRO95502 500 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 CD4P01730 458 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 PFKMP08237 780 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 FAM163BP0C2L3 166 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 BRAFP15056 766 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 SMPD1P17405 629 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 STIP1P31948 543 aaKnown RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 LIG3P49916 1009 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 YARSP54577 528 aaKnown RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 EIF3EP60228 445 aaKnown RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 PLCB3Q01970 1234 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 ACTN3Q08043 901 aaPredicted RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 ACVR2BQ13705 512 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 HIF1AQ16665 826 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 BOLA3Q53S33 107 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 ZC3H12AQ5D1E8 599 aaKnown RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 EFHC2Q5JST6 749 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 OR6B2Q6IFH4 312 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 NOTUMQ6P988 496 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 TRABD2AQ86V40 505 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 SESTD1Q86VW0 696 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 RFX6Q8HWS3 928 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 CCDC13Q8IYE1 715 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 LRRC34Q8IZ02 419 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 CNPY4Q8N129 248 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 NAT8LQ8N9F0 302 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 ATP11CQ8NB49 1132 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 GLIS1Q8NBF1 620 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 DYDC1Q8WWB3 177 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 RSAD2Q8WXG1 361 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 BRI3BPQ8WY22 251 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 CCT6BQ92526 530 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 MAML1Q92585 1016 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 GRAMD1AQ96CP6 724 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 ZBTB10Q96DT7 871 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 C9orf72Q96LT7 481 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 PRMT1Q99873 361 aaKnown RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 FAM118BQ9BPY3 351 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 TMEM121Q9BTD3 319 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 SLC4A5Q9BY07 1137 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 ZWILCHQ9H900 591 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 PRDM16Q9HAZ2 1276 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 SSU72Q9NP77 194 aaKnown RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 CREBZFQ9NS37 354 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 NKIRAS1Q9NYS0 192 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 CNTN3Q9P232 1028 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 HESX1Q9UBX0 185 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 TSPAN16Q9UKR8 245 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 ZMYND8Q9ULU4 1186 aaPredicted RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 UBQLN1Q9UMX0 589 aaKnown RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 SMG5Q9UPR3 1016 aaKnown RBP8.47□□□□□ -1.05
SMAD3-212ENST00000559937 NAALADL1Q9UQQ1 740 aa8.47□□□□□ -1.05
SMAD3-212ENST00000559937 DOCK3Q8IZD9 2030 aa8.46□□□□□ -1.05
SMAD3-212ENST00000559937 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 A6NJR5 290 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 CCT8L1PA6NM43 557 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 PRPSAP2O60256 369 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 GPR32O75388 356 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 SPAG6O75602 509 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 F2P00734 622 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms