RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 INO80BQ9C086 356 aaPredicted RBP5.07□□□□□ -1.6
CTDSPL2-207ENST00000559738 SACM1LQ9NTJ5 587 aa5.07□□□□□ -1.6
CTDSPL2-207ENST00000559738 KLHL42Q9P2K6 505 aa5.07□□□□□ -1.6
CTDSPL2-207ENST00000559738 ISM1B1AKI9 464 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 QSOX1O00391 747 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 PRKCGP05129 697 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 BRAFP15056 766 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 CTGFP29279 349 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 ABCG1P45844 678 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 CYP4F2P78329 520 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 FMO1Q01740 532 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 SATB1Q01826 763 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 GBX1Q14549 363 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 CNGA2Q16280 664 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 TMEM119Q4V9L6 283 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 C3orf38Q5JPI3 329 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 PCID2Q5JVF3 399 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 RNF220Q5VTB9 566 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 ZNF782Q6ZMW2 699 aaPredicted RBP5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 Q6ZWC4 215 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 PARS2Q7L3T8 475 aaKnown RBP5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 PTF1AQ7RTS3 328 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 IZUMO1Q8IYV9 350 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 RP9Q8TA86 221 aaKnown RBP5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 XAGE5Q8WWM1 108 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 LRTOMTQ8WZ04 291 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 DDB2Q92466 427 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 NMD3Q96D46 503 aaKnown RBP5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 FSD1LQ9BXM9 530 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 GBA2Q9HCG7 927 aaPredicted RBP5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 A1CFQ9NQ94 594 aaKnown RBP5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 SH3BP4Q9P0V3 963 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 GABRQQ9UN88 632 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 ADAMTS5Q9UNA0 930 aa5.06□□□□□ -1.6
CTDSPL2-207ENST00000559738 LINC01548A6NM66 108 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 PYCARD-AS1I3L0S3 204 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 JTBO76095 146 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 TJP3O95049 919 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 ZBED1O96006 694 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 HRGP04196 525 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 CACNB3P54284 484 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 PRKAG1P54619 331 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 SRSF4Q08170 494 aaKnown RBP5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 CYP1B1Q16678 543 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 PROSER3Q2NL68 480 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 SLC9A4Q6AI14 798 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 NAPRTQ6XQN6 538 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 CCDC149Q6ZUS6 474 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 SLC29A4Q7RTT9 530 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 KCTD20Q7Z5Y7 419 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 SRGAP1Q7Z6B7 1085 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 SESTD1Q86VW0 696 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 FANCBQ8NB91 859 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 SEMA6DQ8NFY4 1073 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 XPNPEP3Q9NQH7 507 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 OBP2AQ9NY56 170 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 COL20A1Q9P218 1284 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 AFF4Q9UHB7 1163 aaKnown RBP5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 CDY1Q9Y6F8 540 aa5.05□□□□□ -1.6
CTDSPL2-207ENST00000559738 FRMPD2Q68DX3 1309 aaPredicted RBP5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 MBD3L4A6NDZ8 208 aaPredicted RBP5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 MBD3L3A6NE82 208 aaPredicted RBP5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 DNAJC9-AS1A6NH13 148 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 TISP43B9A030 160 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 MARCH6O60337 910 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 PDE8BO95263 885 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 MYF5P13349 255 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 RPS16P62249 146 aaKnown RBP5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 KIAA0753Q2KHM9 967 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 GFOD2Q3B7J2 385 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 SLC44A4Q53GD3 710 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 SUMO4Q6EEV6 95 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 DPY19L3Q6ZPD9 716 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 CAND1Q86VP6 1230 aaKnown RBP5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 GLCCI1Q86VQ1 547 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 DNAJB14Q8TBM8 379 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 SPSB4Q96A44 273 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 APIPQ96GX9 242 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 LENG8Q96PV6 779 aaPredicted RBP5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 C17orf80Q9BSJ5 609 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 THAP7Q9BT49 309 aaPredicted RBP5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 TRMT13Q9NUP7 481 aaKnown RBP5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 ZSCAN32Q9NX65 697 aa5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 DNMT3BQ9UBC3 853 aaKnown RBP5.04□□□□□ -1.6
CTDSPL2-207ENST00000559738 COL3A1P02461 1466 aaPredicted RBP5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 GOLGA6CA6NDK9 693 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 GOLGA6BA6NDN3 693 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 H7C4K7 107 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 GOLIM4O00461 696 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 LATS1O95835 1130 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 NPSP0C0P6 89 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 GOLGA6DP0CG33 693 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 IL1R1P14778 569 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 ZKSCAN1P17029 563 aaPredicted RBP5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 KLRC1P26715 233 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 TPTEP56180 551 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 POLD3Q15054 466 aaPredicted RBP5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 NPY5RQ15761 445 aa5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 PAPD7Q5XG87 772 aaKnown RBP5.03□□□□□ -1.6
CTDSPL2-207ENST00000559738 DARS2Q6PI48 645 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms