RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 DMGDHQ9UI17 866 aaKnown RBP11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 PCDHB5Q9Y5E4 795 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC4A7Q9Y6M7 1214 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 NEMP1O14524 444 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 PFDN6O15212 129 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 PDHA1P08559 390 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 RRM1P23921 792 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 HARS2P49590 506 aaKnown RBP11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 GCNT1Q02742 428 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 ADCY2Q08462 1091 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 PALB2Q86YC2 1186 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC9A9Q8IVB4 645 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 PDIK1LQ8N165 341 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 PAWRQ96IZ0 340 aaKnown RBP11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 KCTD10Q9H3F6 313 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 ARHGAP28Q9P2N2 729 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 CYP2C18P33260 490 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 NOVP48745 357 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 PID1Q7Z2X4 250 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC2A14Q8TDB8 520 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 RUBCNQ92622 972 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 CDKL2Q92772 493 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 SGSM3Q96HU1 749 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 SEC16BQ96JE7 1060 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 MLXIPLQ9NP71 852 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 CHST12Q9NRB3 414 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 LMCD1Q9NZU5 365 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 IPO11Q9UI26 975 aaKnown RBP11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 USH1CQ9Y6N9 552 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 THSD7AQ9UPZ6 1657 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 GIPC1O14908 333 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 TLL1O43897 1013 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 C22orf31O95567 290 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 ACSL3O95573 720 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 GRM5P41594 1212 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 TKTL1P51854 596 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 ZNF571Q7Z3V5 609 aaPredicted RBP11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 SUGP1Q8IWZ8 645 aaKnown RBP11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 EMC1Q8N766 993 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 RILPQ96NA2 401 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 IGFLR1Q9H665 355 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 GGT7Q9UJ14 662 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 CNTNAP2Q9UHC6 1331 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 DIAPH2O60879 1101 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 ITGBL1O95965 494 aaPredicted RBP11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 MYL4P12829 197 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 EPHB3P54753 998 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 ARHGAP15Q53QZ3 475 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 MMGT1Q8N4V1 131 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 ATP2A3Q93084 1043 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 GOLGA2P5Q9HBQ8 144 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 GIT1Q9Y2X7 761 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 CASZ1Q86V15 1759 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 WNK3Q9BYP7 1800 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 BDNFP23560 247 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 CTNNB1P35222 781 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 SERPINB6P35237 376 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 PDE1BQ01064 536 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC39A12Q504Y0 691 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 CYB5D1Q6P9G0 228 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 KLC2Q9H0B6 622 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 SMYD3Q9H7B4 428 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 ARHGAP20Q9P2F6 1191 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 AMACRQ9UHK6 382 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 DUSP10Q9Y6W6 482 aa11.13□□□□□ -0.63
CARMIL3-202ENST00000559694 GRID2IPA4D2P6 1211 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 CFAP73A6NFT4 308 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 ARHGAP42A6NI28 874 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 FGBP02675 491 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 IRX1P78414 480 aaPredicted RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 EFEMP1Q12805 493 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 SDCCAG8Q86SQ7 713 aaPredicted RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 CCDC110Q8TBZ0 833 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 MYCBPAPQ8TBZ2 947 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 ZIC5Q96T25 663 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 DNAJC7Q99615 494 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 WDCPQ9H6R7 721 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 ACP6Q9NPH0 428 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 MSRAQ9UJ68 235 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 C2CD2Q9Y426 696 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 AKAP11Q9UKA4 1901 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 ARVCFO00192 962 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 SPIRE1Q08AE8 756 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 ZACNQ401N2 412 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 LRRC23Q53EV4 343 aaPredicted RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 FAM47EQ6ZV65 393 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 NUDT18Q6ZVK8 323 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 C18orf25Q96B23 403 aaPredicted RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 ACSF2Q96CM8 615 aaPredicted RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 BTBD6Q96KE9 485 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 DDX23Q9BUQ8 820 aaKnown RBP11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 FSD1LQ9BXM9 530 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 Q9Y3F1 56 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 TIAM2Q8IVF5 1701 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 LRRC10BA6NIK2 292 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 PFDN1O60925 122 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 EPHB2P29323 1055 aa11.12□□□□□ -0.63
CARMIL3-202ENST00000559694 BRCC3P46736 316 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms