RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 MDH1BQ5I0G3 518 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 DCP1BQ8IZD4 617 aaKnown RBP17.49■□□□□ 0.39
TPM1-219ENST00000559397 SLC35G2Q8TBE7 412 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 MICAL1Q8TDZ2 1067 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 TFAP2BQ92481 460 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 CALR3Q96L12 384 aaKnown RBP17.49■□□□□ 0.39
TPM1-219ENST00000559397 TADA3O75528 432 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 MTA2O94776 668 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 VNN2O95498 520 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 CA8P35219 290 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 NOP2P46087 812 aaKnown RBP17.48■□□□□ 0.39
TPM1-219ENST00000559397 NDUFV1P49821 464 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 ARPP19P56211 112 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 GRIN2CQ14957 1233 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 SLC39A12Q504Y0 691 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 PPP1R26Q5T8A7 1209 aaPredicted RBP17.48■□□□□ 0.39
TPM1-219ENST00000559397 MEI1Q5TIA1 1274 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 ARHGAP17Q68EM7 881 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 RHOT2Q8IXI1 618 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 MYLPFQ96A32 169 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 MRPL38Q96DV4 380 aaKnown RBP17.48■□□□□ 0.39
TPM1-219ENST00000559397 PCED1BQ96HM7 432 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 EMILIN2Q9BXX0 1053 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 DNAI2Q9GZS0 605 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 PTPRDP23468 1912 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 MYO7AQ13402 2215 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 ABLIM3O94929 683 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 CYP1A2P05177 515 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 CCDC130P13994 396 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 CD19P15391 556 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 BRD2P25440 801 aaKnown RBP17.48■□□□□ 0.39
TPM1-219ENST00000559397 MAPRE1Q15691 268 aaKnown RBP17.48■□□□□ 0.39
TPM1-219ENST00000559397 PTPROQ16827 1216 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 SGO2Q562F6 1265 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 PAQR9Q6ZVX9 377 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 FUKQ8N0W3 1084 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 ZNF606Q8WXB4 792 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 CYFIP2Q96F07 1278 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 B3GNT5Q9BYG0 378 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 PRDM12Q9H4Q4 367 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 FAM49BQ9NUQ9 324 aa17.48■□□□□ 0.39
TPM1-219ENST00000559397 O00370 1275 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 THAP12O43422 761 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 CPB1P15086 417 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 PLXNA3P51805 1871 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 CENPCQ03188 943 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 SMARCB1Q12824 385 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 NFE2Q16621 373 aaPredicted RBP17.47■□□□□ 0.39
TPM1-219ENST00000559397 ZNF697Q5TEC3 545 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 RNF19BQ6ZMZ0 732 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 CEP112Q8N8E3 955 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 MNS1Q8NEH6 495 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 SLC2A14Q8TDB8 520 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 PGLYRP2Q96PD5 576 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 HNRNPABQ99729 332 aaKnown RBP17.47■□□□□ 0.39
TPM1-219ENST00000559397 ABCB6Q9NP58 842 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 OSGEPQ9NPF4 335 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 HYOU1Q9Y4L1 999 aa17.47■□□□□ 0.39
TPM1-219ENST00000559397 MTMR11A4FU01 709 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 EFCAB8A8MWE9 144 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 CLDN5O00501 218 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 ADH1AP07327 375 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 CFHP08603 1231 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 TCP1P17987 556 aaKnown RBP17.46■□□□□ 0.39
TPM1-219ENST00000559397 CDR1P51861 262 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 NOMO3P69849 1222 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 CNGA2Q16280 664 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 HABP4Q5JVS0 413 aaKnown RBP17.46■□□□□ 0.39
TPM1-219ENST00000559397 TPGS2Q68CL5 300 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 PPP1R2P3Q6NXS1 205 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 LILRA6Q6PI73 481 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 ADGRD2Q7Z7M1 963 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 SYCE1Q8N0S2 351 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 ZNF461Q8TAF7 563 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 AFF4Q9UHB7 1163 aaKnown RBP17.46■□□□□ 0.39
TPM1-219ENST00000559397 TSPAN16Q9UKR8 245 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 PCDHGC3Q9UN70 934 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 COG5Q9UP83 839 aa17.46■□□□□ 0.39
TPM1-219ENST00000559397 TGM5O43548 720 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 NCK2O43639 380 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 BUB1BO60566 1050 aaPredicted RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 SRGAP2O75044 1071 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 CLASP2O75122 1294 aaKnown RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 FTCDO95954 541 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 KLRC2P26717 231 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 STILQ15468 1287 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 CFAP221Q4G0U5 840 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 GPR153Q6NV75 609 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 LCLAT1Q6UWP7 414 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 C4orf50Q6ZRC1 276 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 MCOLN2Q8IZK6 566 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 ATAD1Q8NBU5 361 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 C2orf15Q8WU43 125 aaKnown RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 TSC1Q92574 1164 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 FUBP3Q96I24 572 aaKnown RBP eCLIP17.45■□□□□ 0.38
TPM1-219ENST00000559397 OSBPL9Q96SU4 736 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 ZNF518BQ9C0D4 1074 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
TPM1-219ENST00000559397 AVENQ9NQS1 362 aaPredicted RBP17.45■□□□□ 0.38
TPM1-219ENST00000559397 LMCD1Q9NZU5 365 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms